BLASTX nr result

ID: Glycyrrhiza23_contig00023336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023336
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...    55   9e-06
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...    55   9e-06

>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
           gi|223525518|gb|EEF28072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 498

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
 Frame = -1

Query: 383 VGPFSSTTSNNLPNSHLLFLP------PQQYRHNHMFEY----PLSNYLDPIQRATPPP- 237
           +  F + ++NN P +H+  +P      P  + H H   +    PLSNY DP+  + PPP 
Sbjct: 26  ISAFLNHSNNNNPLTHVGPMPNPPPPPPDHHHHQHQTHHSMFDPLSNYFDPLSSSRPPPP 85

Query: 236 ------LPNLDAMWSKLPARSEPNQTDLSGLM-----PCXXXXSPQNQTNP 117
                 L NLD +WSK   RS+ N TDL G +     P     + Q QT P
Sbjct: 86  LTHPNSLLNLDMVWSK-NLRSDTNCTDLGGFIATSSSPTQQFFTNQTQTGP 135


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 46/111 (41%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
 Frame = -1

Query: 428 AFLNNQVQPPPSSHDVGPFSSTTSNNLPNSHLLFLPPQQYRHNH-----------MFEYP 282
           AFLNN   P   SH VGP SS              PPQ   H+H           M   P
Sbjct: 28  AFLNNNNNP--LSH-VGPMSSNP------------PPQPEHHHHHQTHHSSSSSTMLFDP 72

Query: 281 LSNYLDPI----QRATPPP------LPNLDAMWSKLPARSEPNQTDLSGLM 159
           LSNY DP+     R+ PPP      L NLD +WSK   RSEPN TDL G +
Sbjct: 73  LSNYFDPLSSASSRSPPPPFTNPNSLLNLDMVWSK-NLRSEPNCTDLGGFI 122


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