BLASTX nr result

ID: Glycyrrhiza23_contig00023334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023334
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814...   449   e-124
ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807...   449   e-124
ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 k...   434   e-119
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...   370   e-100

>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
          Length = 347

 Score =  449 bits (1156), Expect = e-124
 Identities = 227/273 (83%), Positives = 241/273 (88%), Gaps = 4/273 (1%)
 Frame = -1

Query: 807 MSARSRNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGD 628
           MS RS+NLNSVFYADSYHPIQAGSIDGTD++PHDNAVYRAQLCSSIGLYDPFGDPKATGD
Sbjct: 1   MSVRSKNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGD 60

Query: 627 PYCTLFVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 448
           PYCTLFV RLSRLTTE  LRKVMSKYG+VKNLRLVRDIVTGASRGYAFVEYETEREMRRA
Sbjct: 61  PYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 120

Query: 447 YMDAHHVIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXGQLRFGGREKPFRAPLKP 268
           YMDAHH+IVDDSEIIVDYNRQQLMPGWIP             GQLRFGGREKPFRAPLKP
Sbjct: 121 YMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKP 180

Query: 267 IPYEDLKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREED--FDRRGSDDRNRK--EGA 100
           IPYE+LKKLGIPPPPEGRYMSRFQVPSPPR ER+LSDREED    RRGS+DRNR   E  
Sbjct: 181 IPYEELKKLGIPPPPEGRYMSRFQVPSPPRSERSLSDREEDSHSHRRGSNDRNRNKTEDG 240

Query: 99  RKSPVDMEEGCYKRSSSHREDHSHGRSSVDRSG 1
            +S VD+EEG Y RSSSHR++HS GRSS++RSG
Sbjct: 241 LRSSVDIEEGHY-RSSSHRDNHSRGRSSMERSG 272


>ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
          Length = 358

 Score =  449 bits (1156), Expect = e-124
 Identities = 223/271 (82%), Positives = 239/271 (88%), Gaps = 2/271 (0%)
 Frame = -1

Query: 807 MSARSRNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGD 628
           MS RS+NLNSVFYADSYHPIQAGSIDGTD++PHDNAVYRAQLCSSIGLYDPFGDP+A GD
Sbjct: 1   MSVRSKNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRAAGD 60

Query: 627 PYCTLFVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 448
           PYCTLFV RLSRLT E  LRKVMSKYG+VKN RLVRDIVTGASRGYAFVEYETEREMRRA
Sbjct: 61  PYCTLFVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREMRRA 120

Query: 447 YMDAHHVIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXGQLRFGGREKPFRAPLKP 268
           YMDAHH+IVDDSEIIVDYNRQQLMPGWIP             GQLRFGG+EKPFRAPLKP
Sbjct: 121 YMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAPLKP 180

Query: 267 IPYEDLKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREED--FDRRGSDDRNRKEGARK 94
           IPYE+LKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREED    RRGS+DRNR E + +
Sbjct: 181 IPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDSHSHRRGSNDRNRTEDSHR 240

Query: 93  SPVDMEEGCYKRSSSHREDHSHGRSSVDRSG 1
           S VD+ EG + RSSSHR+DHS GRSS++RSG
Sbjct: 241 SSVDIGEG-HCRSSSHRDDHSRGRSSLERSG 270


>ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula] gi|355499353|gb|AES80556.1| U11/U12 small
           nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula]
          Length = 566

 Score =  434 bits (1116), Expect = e-119
 Identities = 214/268 (79%), Positives = 235/268 (87%)
 Frame = -1

Query: 807 MSARSRNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGD 628
           M+ARSRNLNSVFY+++YHPIQAGSIDGTDI+PHDNA++RAQLCSSIGLYDPFGDPKATGD
Sbjct: 1   MNARSRNLNSVFYSNAYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGD 60

Query: 627 PYCTLFVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 448
           PYCTLFVGRLSRLTTE TLRKVMS++GQVKNLRLVRDIVTGASRGYAFVE+ETEREMRRA
Sbjct: 61  PYCTLFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRA 120

Query: 447 YMDAHHVIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXGQLRFGGREKPFRAPLKP 268
           YMDAHH+IVDD EIIVDYNRQQLMPGWIP             GQLRFGGREKPFRAPLKP
Sbjct: 121 YMDAHHLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNKESGQLRFGGREKPFRAPLKP 180

Query: 267 IPYEDLKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDFDRRGSDDRNRKEGARKSP 88
           IPYE+LKKLGIPPPPEG YMSRFQVPSPPRR+ NLSD++ED DRRGS +RN  + ++   
Sbjct: 181 IPYEELKKLGIPPPPEGSYMSRFQVPSPPRRDTNLSDKDEDSDRRGSSERNMTKKSK--- 237

Query: 87  VDMEEGCYKRSSSHREDHSHGRSSVDRS 4
             MEE  YK SSSHR D+S GRSS +RS
Sbjct: 238 --MEEEHYKISSSHRGDYSRGRSSSERS 263


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  373 bits (958), Expect = e-101
 Identities = 188/268 (70%), Positives = 208/268 (77%), Gaps = 7/268 (2%)
 Frame = -1

Query: 792 RNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 613
           R++NSVFYAD+YHPIQAGSIDGTD  PHDNAVYRA LCSS GLYDPFGDPKA GDPYCT+
Sbjct: 4   RSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPYCTI 63

Query: 612 FVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 433
           FVGRLS LTTE TLRK MSKYG+VKNLRLVR IVTGASRGYAFVE+ETEREMRRAY D  
Sbjct: 64  FVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYKDGQ 123

Query: 432 HVIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXGQLRFGGREKPFRAPLKPIPYED 253
           H  +DDSEIIVDYNRQQLMPGWIP             GQLRFGGRE+PFRAPL+ IPY+D
Sbjct: 124 HSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTIPYDD 183

Query: 252 LKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDFDRRGSDDRNRKEGA-----RKSP 88
           LK+LGIPPPPEGRYMS ++VPSPPRR+R+  D+EE   RR S D+  +E +     R   
Sbjct: 184 LKRLGIPPPPEGRYMSHYEVPSPPRRKRSSRDKEESSHRRSSIDKEAEESSNIRSYRDKE 243

Query: 87  VDMEEGCY--KRSSSHREDHSHGRSSVD 10
              E G Y  KRSS  RE+H   RS VD
Sbjct: 244 EHYERGGYHHKRSSLDREEHYEKRSPVD 271


>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score =  370 bits (949), Expect = e-100
 Identities = 184/262 (70%), Positives = 209/262 (79%), Gaps = 3/262 (1%)
 Frame = -1

Query: 783 NSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTLFVG 604
           N+VFYA+SYHPIQAGSIDGTD LPHDNAVYRA LCSS GLYDPFGDPK  GDPYCT+FVG
Sbjct: 7   NAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPYCTVFVG 66

Query: 603 RLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHVI 424
            L+ LTTE TL K MSK+G+VK+LRLVR IVTGAS+GYAFVEYETEREMRRAY DAHH +
Sbjct: 67  HLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYEDAHHSM 126

Query: 423 VDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXGQLRFGGREKPFRAPLKPIPYEDLKK 244
           +DD EIIVDYNRQQLMPGWIP             GQLRFGGRE+PFRAPL+PIP +DLK+
Sbjct: 127 IDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIPLDDLKR 186

Query: 243 LGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDFDRRGS---DDRNRKEGARKSPVDMEE 73
           LGIPPPPEGRYMSRFQVP PPRR+R+  DREE   R  S   +DR  K G+    ++ EE
Sbjct: 187 LGIPPPPEGRYMSRFQVPPPPRRKRSNMDREEPSHRGSSIDREDRYHKGGS----IEGEE 242

Query: 72  GCYKRSSSHREDHSHGRSSVDR 7
             ++ SS  RE+HSH RSS+D+
Sbjct: 243 HSHEGSSVDREEHSHRRSSIDK 264


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