BLASTX nr result

ID: Glycyrrhiza23_contig00023326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023326
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]         100   2e-19
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...    90   2e-16
emb|CAN75572.1| hypothetical protein VITISV_009507 [Vitis vinifera]    89   3e-16
ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
          Length = 622

 Score =  100 bits (248), Expect = 2e-19
 Identities = 65/144 (45%), Positives = 71/144 (49%)
 Frame = -3

Query: 432 MSYVPPHLRNXXXXXXXXXXXXXXXXXTLDDXXXXXXHTTKLAFXXXXXXXXXXXXXXXX 253
           MSYVPPHLRN                 TLD         T LAF                
Sbjct: 1   MSYVPPHLRNASSTAVATTTRPSASSGTLDHHHH----NTNLAFSSSYPHSNSSSLANGS 56

Query: 252 XXXXXXXXXXXXXXXXXXXXRILAVPDPLFPHWQPSERVSRFNPDQIEEVRLRLNLDATV 73
                                ++ VPD +FP+WQPSERVSR NPDQIEEV +RLNLD TV
Sbjct: 57  RRTSAATSAISE---------LVTVPDTVFPNWQPSERVSRMNPDQIEEV-VRLNLDVTV 106

Query: 72  ASDSPAAPAPIESFTDMCLDPSIM 1
           +SDS AAP PIESF DMCL PSIM
Sbjct: 107 SSDSTAAPGPIESFNDMCLHPSIM 130


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/62 (67%), Positives = 50/62 (80%)
 Frame = -3

Query: 186 LAVPDPLFPHWQPSERVSRFNPDQIEEVRLRLNLDATVASDSPAAPAPIESFTDMCLDPS 7
           ++VP P+FP+W PS+RV RFNPDQI E+R RLN+D +VAS SP APA IESF DMCL  S
Sbjct: 66  ISVPQPVFPNWTPSDRVLRFNPDQIAEIRSRLNIDVSVASGSPLAPAAIESFEDMCLHQS 125

Query: 6   IM 1
           IM
Sbjct: 126 IM 127


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 564

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/62 (66%), Positives = 49/62 (79%)
 Frame = -3

Query: 186 LAVPDPLFPHWQPSERVSRFNPDQIEEVRLRLNLDATVASDSPAAPAPIESFTDMCLDPS 7
           L+VPDP+ P W PSERV R N  Q+E+VR RLN++ TVAS SP APAPIESF DMCL+ +
Sbjct: 72  LSVPDPVLPQWTPSERVLRLNSQQVEDVRARLNIEVTVASGSPPAPAPIESFEDMCLNQN 131

Query: 6   IM 1
           IM
Sbjct: 132 IM 133


>emb|CAN75572.1| hypothetical protein VITISV_009507 [Vitis vinifera]
          Length = 489

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = -3

Query: 183 AVPDPLFPHWQPSERVSRFNPDQIEEVRLRLNLDATVASDSPAAPAPIESFTDMCLDPSI 4
           +VP+P+FP W+PS+RV    P+QIEEVRLRLN+D TVA D P APAPIESFTDM L  SI
Sbjct: 75  SVPEPVFPQWKPSDRVFXMKPEQIEEVRLRLNVDVTVAPDLPPAPAPIESFTDMGLHQSI 134

Query: 3   M 1
           M
Sbjct: 135 M 135


>ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = -3

Query: 186 LAVPDPLFPHWQPSERVSRFNPDQIEEVRLRLNLDATVASDSPAAPAPIESFTDMCLDPS 7
           ++VP P+FP W PS+RV RF PDQIEE+R +L ++ +VAS SP APAPIESF DMCL  S
Sbjct: 65  ISVPQPVFPQWTPSDRVLRFTPDQIEEIRSQLKINVSVASGSPPAPAPIESFEDMCLHQS 124

Query: 6   IM 1
           IM
Sbjct: 125 IM 126


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