BLASTX nr result

ID: Glycyrrhiza23_contig00023277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023277
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   232   2e-59
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   230   8e-59
emb|CBI36034.3| unnamed protein product [Vitis vinifera]              202   3e-50
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              200   9e-50
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   200   9e-50

>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355521082|gb|AET01536.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 643

 Score =  232 bits (592), Expect = 2e-59
 Identities = 119/128 (92%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   LIAEGHKDGEASPVVYVSGEESVEQIGNRADRLTIESDIYLYSSNDIEDILKKVQYLSPR 180
           ++AEG +D  ASPVVYVSGEESVEQIGNRADRLTI SDIYLYSSNDIEDILKKVQY+SPR
Sbjct: 204 MLAEGDEDVGASPVVYVSGEESVEQIGNRADRLTIGSDIYLYSSNDIEDILKKVQYISPR 263

Query: 181 ALVVDSVQTVYLKGIMGSPGGIMQVKECTSAFLRFAKTTNIPVLLIGHVTKSGDIAGPRV 360
           ALVVDSVQTVYLKGIMGSPGGIMQVKECTSA LRFAKTTNIPVLLIGHVTKSGDIAGPRV
Sbjct: 264 ALVVDSVQTVYLKGIMGSPGGIMQVKECTSALLRFAKTTNIPVLLIGHVTKSGDIAGPRV 323

Query: 361 LEHIVDVV 384
           LEHIVDVV
Sbjct: 324 LEHIVDVV 331


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  230 bits (587), Expect = 8e-59
 Identities = 116/128 (90%), Positives = 121/128 (94%)
 Frame = +1

Query: 1   LIAEGHKDGEASPVVYVSGEESVEQIGNRADRLTIESDIYLYSSNDIEDILKKVQYLSPR 180
           +IA+G  DGEA PVVYVSGEESVEQIGNRADRL IESDIYLYSSND+EDILKKVQYLSP 
Sbjct: 205 IIAKGDSDGEACPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQYLSPG 264

Query: 181 ALVVDSVQTVYLKGIMGSPGGIMQVKECTSAFLRFAKTTNIPVLLIGHVTKSGDIAGPRV 360
           AL+VDS+QTVYLKGIMGSPGGIMQVKECTSA LRFAK TNIPVLLIGHVTKSGDIAGPRV
Sbjct: 265 ALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRV 324

Query: 361 LEHIVDVV 384
           LEHIVDVV
Sbjct: 325 LEHIVDVV 332


>emb|CBI36034.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  202 bits (513), Expect = 3e-50
 Identities = 104/129 (80%), Positives = 116/129 (89%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   LIAEGHKDGEASPVVYVSGEESVEQIGNRADRLTIES-DIYLYSSNDIEDILKKVQYLSP 177
           +IAEGH D  +SPVVYVSGEESVEQIGNRADR+ IE+ D++LYSS DIEDIL +V +LSP
Sbjct: 100 IIAEGHDD-RSSPVVYVSGEESVEQIGNRADRMRIETEDLFLYSSTDIEDILGQVHHLSP 158

Query: 178 RALVVDSVQTVYLKGIMGSPGGIMQVKECTSAFLRFAKTTNIPVLLIGHVTKSGDIAGPR 357
           RALVVDS+QTVYLKG+ GS GG++QVKECTSA LRFAK TNIPV LIGHVTKSGDIAGPR
Sbjct: 159 RALVVDSIQTVYLKGVTGSAGGLLQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPR 218

Query: 358 VLEHIVDVV 384
           VLEHIVDVV
Sbjct: 219 VLEHIVDVV 227


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  200 bits (509), Expect = 9e-50
 Identities = 102/129 (79%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   LIAEGHKDGEASPVVYVSGEESVEQIGNRADRLTIESD-IYLYSSNDIEDILKKVQYLSP 177
           +IAEGH  G +SPVVYVSGEESVEQIGNRADR+ I+++ ++LYSS DIEDIL +V  LSP
Sbjct: 232 IIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSP 291

Query: 178 RALVVDSVQTVYLKGIMGSPGGIMQVKECTSAFLRFAKTTNIPVLLIGHVTKSGDIAGPR 357
           RALVVDS+QTVYLKG++GS GG+ QVKECTSA LRFAK TNIPV LIGHVTKSGDIAGPR
Sbjct: 292 RALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPR 351

Query: 358 VLEHIVDVV 384
           VLEHIVDVV
Sbjct: 352 VLEHIVDVV 360


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  200 bits (509), Expect = 9e-50
 Identities = 102/129 (79%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   LIAEGHKDGEASPVVYVSGEESVEQIGNRADRLTIESD-IYLYSSNDIEDILKKVQYLSP 177
           +IAEGH  G +SPVVYVSGEESVEQIGNRADR+ I+++ ++LYSS DIEDIL +V  LSP
Sbjct: 273 IIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSP 332

Query: 178 RALVVDSVQTVYLKGIMGSPGGIMQVKECTSAFLRFAKTTNIPVLLIGHVTKSGDIAGPR 357
           RALVVDS+QTVYLKG++GS GG+ QVKECTSA LRFAK TNIPV LIGHVTKSGDIAGPR
Sbjct: 333 RALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPR 392

Query: 358 VLEHIVDVV 384
           VLEHIVDVV
Sbjct: 393 VLEHIVDVV 401


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