BLASTX nr result

ID: Glycyrrhiza23_contig00023262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023262
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   116   2e-24
ref|XP_003610958.1| F-box family protein [Medicago truncatula] g...   110   1e-22
ref|XP_003593998.1| FBD-associated F-box protein [Medicago trunc...   108   3e-22
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   108   5e-22
ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   105   3e-21

>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 3/126 (2%)
 Frame = -1

Query: 370 LPMFPNLIDLELTFDRYNCYRRWKWVLEVLGHCPKLQNLTILD---LSDTVSGEWEEPQT 200
           LPMF +LI LEL+ +    Y RW+W+L +L H PKLQNLTI D   + + +   W++P  
Sbjct: 257 LPMFESLIHLELSLNFKIWYPRWEWLLGMLKHSPKLQNLTIQDNKAIEEAIDECWKDPPI 316

Query: 199 VAECLSSQLRTCSLANYKGDCCELQFAKYIMQNSKVLRSMTIQSSCEEPNPDIDTYEKLQ 20
           V ECLSSQL+TC +  YKG   +L+F KYIM+NSKVL +MTI S+       +D   K Q
Sbjct: 317 VPECLSSQLKTCHIRVYKGTKYDLEFTKYIMENSKVLETMTINST-----RSLDMNVKYQ 371

Query: 19  MLMKLS 2
           +LMKLS
Sbjct: 372 LLMKLS 377


>ref|XP_003610958.1| F-box family protein [Medicago truncatula]
           gi|355512293|gb|AES93916.1| F-box family protein
           [Medicago truncatula]
          Length = 386

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
 Frame = -1

Query: 397 MNVDALDYDLPMFPNLIDLELTFDRYNCYRRWKWVLEVLGHCPKLQNLTI---LDLSDTV 227
           MNV+   Y+ PMF NL+D+++ F   +C   W W  EVL +C KLQNLT+       D +
Sbjct: 240 MNVNDCVYN-PMFHNLVDMDVAFAWGSCNIIWNWFAEVLHNCHKLQNLTLCKNFKCVDEI 298

Query: 226 SGE-WEEPQTVAECLSSQLRTCSLANYKGDCCELQFAKYIMQNSKVLRSMTIQS--SCEE 56
             E W++PQ  +ECLS+QLRT +L NY G  CE QFAKYIMQ SKVL++MTIQS  + + 
Sbjct: 299 GKEHWKDPQIDSECLSTQLRTFTLKNYIGLSCEAQFAKYIMQKSKVLQNMTIQSTLNIDP 358

Query: 55  PNPDIDTY 32
            +P ++T+
Sbjct: 359 EHPMLETF 366


>ref|XP_003593998.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355483046|gb|AES64249.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 215

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 2/125 (1%)
 Frame = -1

Query: 370 LPMFPNLIDLEL--TFDRYNCYRRWKWVLEVLGHCPKLQNLTILDLSDTVSGEWEEPQTV 197
           +P+F NL  LEL       +   +WKW++E+L H PKLQ+L I +        WEEP+ V
Sbjct: 91  VPIFHNLTQLELFSNLKGKSWPEKWKWMVEMLQHSPKLQHLIIHE------DYWEEPKIV 144

Query: 196 AECLSSQLRTCSLANYKGDCCELQFAKYIMQNSKVLRSMTIQSSCEEPNPDIDTYEKLQM 17
            ECLSSQL+TC   NY+G  CELQFA+Y+M NSKVL +M I+S+       ID  EK QM
Sbjct: 145 PECLSSQLKTCLFKNYRGKRCELQFAEYVMHNSKVLSNMRIRSA-----HFIDINEKYQM 199

Query: 16  LMKLS 2
           L KLS
Sbjct: 200 LQKLS 204


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score =  108 bits (270), Expect = 5e-22
 Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
 Frame = -1

Query: 376 YDLPMFPNLIDLELTFD-RYNCYRRWKWVLEVLGHCPKLQNLTI----LDLSDTVSGEWE 212
           Y+L  F NL  +++ F+  +N   +WKW+ +VL HCPKLQNLTI     D +     +W 
Sbjct: 219 YELSTFLNLTHMKIVFELTHNWPGKWKWLTKVLQHCPKLQNLTIHEGSSDRNKIEDVDWM 278

Query: 211 EPQTVAECLSSQLRTCSLANYKGDCCELQFAKYIMQNSKVLRSMTIQSSCEEPNPDIDTY 32
           +   V EC SSQL+TCSL  YKG  C+ QFAKYI++N+KVL++MTI +S       +D  
Sbjct: 279 DTPIVPECFSSQLKTCSLIGYKGMNCDFQFAKYILKNAKVLQTMTINAS------PVDIN 332

Query: 31  EKLQMLMKLS 2
            K Q+L+KL+
Sbjct: 333 IKHQILIKLT 342


>ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497291|gb|AES78494.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 352

 Score =  105 bits (263), Expect = 3e-21
 Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
 Frame = -1

Query: 376 YDLPMFPNLIDLELTFDRYNCY--RRWKWVLEVLGHCPKLQNLTILDLSDTVSGEWE--- 212
           Y +P F NL +L++ F   + Y  ++WKW+ EVL HCPKLQNLTI + S   +   +   
Sbjct: 214 YQVPTFLNLTNLKIVFQVTHKYWPKKWKWLTEVLHHCPKLQNLTIHEGSSDRNKIEDVYR 273

Query: 211 -EPQTVAECLSSQLRTCSLANYKGDCCELQFAKYIMQNSKVLRSMTIQSSCEEPNPDIDT 35
            +   V ECLSSQL+TCSL  Y+G  C+ QFAKYI++N+KVL+ MTI +S       +D 
Sbjct: 274 MDTPIVPECLSSQLKTCSLKGYRGVNCDFQFAKYILKNAKVLQIMTINAS------SMDI 327

Query: 34  YEKLQMLMKLS 2
             K Q+L+KLS
Sbjct: 328 NIKHQILIKLS 338


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