BLASTX nr result

ID: Glycyrrhiza23_contig00023251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023251
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520686.1| PREDICTED: uncharacterized protein LOC100790...    80   2e-13
ref|XP_003553588.1| PREDICTED: uncharacterized protein LOC100814...    76   3e-12
ref|XP_002277252.1| PREDICTED: uncharacterized protein LOC100244...    69   3e-10
emb|CBI30258.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002326413.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_003520686.1| PREDICTED: uncharacterized protein LOC100790018 [Glycine max]
          Length = 518

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
 Frame = +3

Query: 3   RTASLLLEASHRIXXXXXXXXXXXXX---GLGLFGSVFKRFTQRNQNHRKREIEGGGGVN 173
           RTA+LLLEA+ RI                  GLFGS++KR TQRNQ  +K EIE GGGV 
Sbjct: 101 RTAALLLEAALRIQKHSSHVTSKPKTKAHSFGLFGSLYKRLTQRNQ--KKHEIESGGGVK 158

Query: 174 VSVKDILKWDSSAAGRRKLS--NGKERQKMDSDSQNDN 281
           +SVKD+LKWDSS  GRRK+S  NGK +++ ++ + N N
Sbjct: 159 ISVKDVLKWDSS-VGRRKVSKANGKCKEQEETVNVNVN 195


>ref|XP_003553588.1| PREDICTED: uncharacterized protein LOC100814311 [Glycine max]
          Length = 518

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
 Frame = +3

Query: 3   RTASLLLEASHRIXXXXXXXXXXXXXGLGLFGSVFKRFTQRNQNHRKREIE-GGGGVNVS 179
           RTA+LLLEA+ RI               GLFGS++KR TQR+  H++REIE GGGGV VS
Sbjct: 101 RTAALLLEAALRIQKHTSKPKTKAQ-SFGLFGSLYKRLTQRS--HKRREIECGGGGVKVS 157

Query: 180 VKDILKWDSSAAGRRKLS--NGK 242
           VKD+LKWDSS  GRRK S  NGK
Sbjct: 158 VKDVLKWDSS-VGRRKASKANGK 179


>ref|XP_002277252.1| PREDICTED: uncharacterized protein LOC100244201 [Vitis vinifera]
          Length = 530

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   RTASLLLEASHRIXXXXXXXXXXXXX--GLGLFGSVFKRFTQRNQNHRKREIEGGGGVNV 176
           RTA++LLEA+ RI               G G+FGS+ KR TQRN+N RKREIE G G+ V
Sbjct: 98  RTAAMLLEAALRIQKQSSPKPKAQNKNVGFGIFGSIMKRLTQRNRN-RKREIE-GDGLRV 155

Query: 177 SVKDILKWDSSAAGRRKLS 233
           SVKDIL+WDSS  GR+K +
Sbjct: 156 SVKDILRWDSS-VGRKKFT 173


>emb|CBI30258.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +3

Query: 3   RTASLLLEASHRIXXXXXXXXXXXXX--GLGLFGSVFKRFTQRNQNHRKREIEGGGGVNV 176
           RTA++LLEA+ RI               G G+FGS+ KR TQRN+N RKREIE G G+ V
Sbjct: 193 RTAAMLLEAALRIQKQSSPKPKAQNKNVGFGIFGSIMKRLTQRNRN-RKREIE-GDGLRV 250

Query: 177 SVKDILK--WDSS 209
           SVKDIL   W  S
Sbjct: 251 SVKDILSSVWSES 263


>ref|XP_002326413.1| predicted protein [Populus trichocarpa] gi|222833606|gb|EEE72083.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   RTASLLLEASHRIXXXXXXXXXXXXX-GLGLFGSVFKRFTQRNQNHRKREIEGGGGVNVS 179
           RTA+LLLEA+ ++              G GLFG++ K+ T RN+        G  G  VS
Sbjct: 97  RTAALLLEAAVKVQKQSSSPKTKSQNNGFGLFGTLLKKLTHRNKTRNHEIRTGNHGGKVS 156

Query: 180 VKDILKWDSSAAGRRKLSNGKERQKMDSDSQ 272
           VK+IL+W+SS  GR  LSN  + +K +   +
Sbjct: 157 VKEILRWNSS-VGRGNLSNEIDHRKQEQGQE 186


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