BLASTX nr result

ID: Glycyrrhiza23_contig00023234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023234
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   409   e-112
ref|XP_003517903.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   402   e-110
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   353   3e-95
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   316   5e-84

>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 421

 Score =  409 bits (1050), Expect = e-112
 Identities = 209/266 (78%), Positives = 221/266 (83%)
 Frame = +1

Query: 172 MGDVLGPDLISDLPQSIIESILIQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPLG 351
           MGDV+GPDLISDLPQSIIESIL+QLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVP  
Sbjct: 1   MGDVMGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPFS 60

Query: 352 HDRFVLEKSVVKFITRLLFLHQGPIHKFQITNSSLQSCPEIDQWILFLSRNDIKXXXXXX 531
           +DR  +EKSVVKFITR+LFLHQGPIHKFQITNS LQSCPEIDQWILFLSRNDIK      
Sbjct: 61  NDREAVEKSVVKFITRVLFLHQGPIHKFQITNSKLQSCPEIDQWILFLSRNDIKELVMEL 120

Query: 532 XXXXFFRIPSCLFSCKKLTRLELSRCELDPPIGFKGFVCLKSLNLHQVLISPDAIEXXXX 711
               FFRIPS LF+C KLTRLELSRCELDPP  FKGF  L+SLNLHQVLISPDA+E    
Sbjct: 121 GEGEFFRIPSNLFNCGKLTRLELSRCELDPPHSFKGFAGLRSLNLHQVLISPDAVESLIS 180

Query: 712 XXXXXXXXXXXYFDCLALSICAPNLKYLSLEGEFKDIYLVDTPLLVELSVAMYMNDDIVA 891
                      YFD LAL+ICAPNLKYL LEGEFKDI L DTPLLVE+S+AMYM DDI A
Sbjct: 181 RCPLLESLSLAYFDNLALTICAPNLKYLYLEGEFKDICLEDTPLLVEISIAMYMTDDI-A 239

Query: 892 EHFGISSTCNFVKFLGGVPNLERLVG 969
           EHF  SS CNFVKFLGGVPNLE+LVG
Sbjct: 240 EHFEQSSNCNFVKFLGGVPNLEKLVG 265


>ref|XP_003517903.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 421

 Score =  402 bits (1034), Expect = e-110
 Identities = 205/266 (77%), Positives = 219/266 (82%)
 Frame = +1

Query: 172 MGDVLGPDLISDLPQSIIESILIQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPLG 351
           M D +GPDLISDLPQSIIESIL+QLPIRDAVRTSILSSKWRYKWASIT+LVFDDKCVP  
Sbjct: 1   MDDAMGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITRLVFDDKCVPFS 60

Query: 352 HDRFVLEKSVVKFITRLLFLHQGPIHKFQITNSSLQSCPEIDQWILFLSRNDIKXXXXXX 531
           +DR V+EKSVVKFITR+LFL QGPIHKFQITNS LQSCPEIDQWILFLSRNDIK      
Sbjct: 61  NDREVVEKSVVKFITRVLFLRQGPIHKFQITNSKLQSCPEIDQWILFLSRNDIKELVMEL 120

Query: 532 XXXXFFRIPSCLFSCKKLTRLELSRCELDPPIGFKGFVCLKSLNLHQVLISPDAIEXXXX 711
               FFRIPS LF+C KLTRL+LSRCE DPP  FKGFVCL+SLNLHQVLISPDAIE    
Sbjct: 121 GEGEFFRIPSSLFNCGKLTRLDLSRCEFDPPHSFKGFVCLRSLNLHQVLISPDAIESLIS 180

Query: 712 XXXXXXXXXXXYFDCLALSICAPNLKYLSLEGEFKDIYLVDTPLLVELSVAMYMNDDIVA 891
                      YFD LAL+ICAPNLKYL LEGEFKDI L DTPLLVE+++AMYM DDI A
Sbjct: 181 RCPLLESLSLSYFDNLALTICAPNLKYLYLEGEFKDICLEDTPLLVEITIAMYMTDDI-A 239

Query: 892 EHFGISSTCNFVKFLGGVPNLERLVG 969
           EHF   S CNFVKFLGGVPNLE+LVG
Sbjct: 240 EHFEQISNCNFVKFLGGVPNLEKLVG 265


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score =  353 bits (906), Expect = 3e-95
 Identities = 174/266 (65%), Positives = 208/266 (78%)
 Frame = +1

Query: 172 MGDVLGPDLISDLPQSIIESILIQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPLG 351
           MGD   PD I+DLP SIIESIL +LPIRDAV+TSILS+KWRY+WA++T LVFDDKCV + 
Sbjct: 1   MGDYEVPDFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMY 60

Query: 352 HDRFVLEKSVVKFITRLLFLHQGPIHKFQITNSSLQSCPEIDQWILFLSRNDIKXXXXXX 531
            D+ VLE  +VKFI+R LFLH GPIHKFQ++ S LQ CP+IDQW+LFLSR+DIK      
Sbjct: 61  CDKGVLESRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLEL 120

Query: 532 XXXXFFRIPSCLFSCKKLTRLELSRCELDPPIGFKGFVCLKSLNLHQVLISPDAIEXXXX 711
               +FR+PSCLF+CKKLTRLEL+RCE DPP  FKGF+CLKSLNL+QVL++P+AIE    
Sbjct: 121 GEGEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLIS 180

Query: 712 XXXXXXXXXXXYFDCLALSICAPNLKYLSLEGEFKDIYLVDTPLLVELSVAMYMNDDIVA 891
                      YFD L L++ APNLKYL LEGEFKDI L +TPLLV +S+AMYM +DI A
Sbjct: 181 GCPLLESLSLSYFDSLVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDI-A 239

Query: 892 EHFGISSTCNFVKFLGGVPNLERLVG 969
           EHF  SS+CNF+KFLGGVP LERL+G
Sbjct: 240 EHFEQSSSCNFIKFLGGVPRLERLIG 265


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  352 bits (902), Expect = 1e-94
 Identities = 178/266 (66%), Positives = 206/266 (77%)
 Frame = +1

Query: 172 MGDVLGPDLISDLPQSIIESILIQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPLG 351
           MGDV  PDLISDLPQSI+ESIL +LPIRDAVRTSILSSKWRY+W ++T LVFDDKC+ + 
Sbjct: 1   MGDVEDPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKCIRMC 60

Query: 352 HDRFVLEKSVVKFITRLLFLHQGPIHKFQITNSSLQSCPEIDQWILFLSRNDIKXXXXXX 531
            DR V+E  +V FITR LFLHQGPIHKFQ++ S LQ CP+IDQWILFLSR+DIK      
Sbjct: 61  SDRPVVENCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLEL 120

Query: 532 XXXXFFRIPSCLFSCKKLTRLELSRCELDPPIGFKGFVCLKSLNLHQVLISPDAIEXXXX 711
               +FR+PSCLF+CKKLT LEL RCE DPP  FKGF+CL+SL+LHQVL++P+AIE    
Sbjct: 121 GEGEWFRVPSCLFNCKKLTCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLIS 180

Query: 712 XXXXXXXXXXXYFDCLALSICAPNLKYLSLEGEFKDIYLVDTPLLVELSVAMYMNDDIVA 891
                      YFD LAL+I APNLKYL LEGEF DI L +TPLLV +SVAMYMND+ +A
Sbjct: 181 GCPLLESLALSYFDSLALNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDE-MA 239

Query: 892 EHFGISSTCNFVKFLGGVPNLERLVG 969
           E F  SS CNF+KFLGGVP LERL G
Sbjct: 240 ECFEQSSKCNFIKFLGGVPRLERLAG 265


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score =  316 bits (810), Expect = 5e-84
 Identities = 159/266 (59%), Positives = 196/266 (73%)
 Frame = +1

Query: 172 MGDVLGPDLISDLPQSIIESILIQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPLG 351
           MGDVLG D +SDLPQSIIE IL +LPIRDA+RTSILS +WRYKW ++TQLVFDD CV + 
Sbjct: 1   MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 352 HDRFVLEKSVVKFITRLLFLHQGPIHKFQITNSSLQSCPEIDQWILFLSRNDIKXXXXXX 531
           +D   + + ++ FIT +LFLH+GPIHKF ++ + LQ+ P++DQW+LFLSR  I+      
Sbjct: 61  NDG--IYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIEL 118

Query: 532 XXXXFFRIPSCLFSCKKLTRLELSRCELDPPIGFKGFVCLKSLNLHQVLISPDAIEXXXX 711
               +FR+ SCLF+C KLT LEL RCELDPP  FKGF+CLKSL LHQVLI+P+ IE    
Sbjct: 119 GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIS 178

Query: 712 XXXXXXXXXXXYFDCLALSICAPNLKYLSLEGEFKDIYLVDTPLLVELSVAMYMNDDIVA 891
                      YFD L L+ICAPNLKYL LEGEF+DI L +TPLLV +SVA+YMND+  +
Sbjct: 179 NCPLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE--S 236

Query: 892 EHFGISSTCNFVKFLGGVPNLERLVG 969
           E FG  S CN+ KFLGGVP LE+L G
Sbjct: 237 EPFGDLSDCNYEKFLGGVPYLEKLTG 262


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