BLASTX nr result

ID: Glycyrrhiza23_contig00023226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023226
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43315.1| unknown [Medicago truncatula]                           59   9e-12
ref|XP_003525824.1| PREDICTED: F-box protein SKIP2-like [Glycine...    58   9e-07
ref|XP_003550997.1| PREDICTED: F-box protein SKIP2-like [Glycine...    55   5e-06

>gb|AFK43315.1| unknown [Medicago truncatula]
          Length = 129

 Score = 58.5 bits (140), Expect(2) = 9e-12
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +1

Query: 22  RLSMFRTKLGFLAGRNFVPCAFRRWTNID 108
           RLSMFRTK GFL GRNF PCAFRRW N+D
Sbjct: 39  RLSMFRTKFGFLVGRNFAPCAFRRWANVD 67



 Score = 36.2 bits (82), Expect(2) = 9e-12
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +3

Query: 177 TICLMMSSCKFSGIFLQVLLTEFCFSMGIANSSCYLCF*LHV 302
           TICLM  SC FSG+FL++ +TE  F           C  LHV
Sbjct: 88  TICLMSYSCLFSGMFLEMFITELFFYYREHEKKLVFCL-LHV 128


>ref|XP_003525824.1| PREDICTED: F-box protein SKIP2-like [Glycine max]
          Length = 532

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +1

Query: 22  RLSMFRTKLGFLAGRNFVPCAFRRWTNIDTI 114
           RLSMFR K GFLAGRN VPCAFR+W NID I
Sbjct: 496 RLSMFRNKFGFLAGRNLVPCAFRKWANIDDI 526


>ref|XP_003550997.1| PREDICTED: F-box protein SKIP2-like [Glycine max]
          Length = 539

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/31 (77%), Positives = 25/31 (80%)
 Frame = +1

Query: 22  RLSMFRTKLGFLAGRNFVPCAFRRWTNIDTI 114
           RLSM R K GFLAGRN +PCAFRRW NID I
Sbjct: 503 RLSMLRNKFGFLAGRNLMPCAFRRWANIDDI 533


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