BLASTX nr result

ID: Glycyrrhiza23_contig00023216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023216
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...   125   5e-27
gb|AFK48656.1| unknown [Lotus japonicus]                              108   3e-22
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]    94   1e-17
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]    91   1e-16
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]    89   5e-16

>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
           gi|355493153|gb|AES74356.1| Histone deacetylase
           [Medicago truncatula]
          Length = 1775

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/94 (60%), Positives = 74/94 (78%)
 Frame = -1

Query: 290 RLPSSAPHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVPQIPPRYLTEEDRES 111
           R+ ++A  TF   +S+KLDD N+LQWKQQVEGV+RG K+  F++ P+IPP YLT+  RE+
Sbjct: 461 RVTAAASKTFKQVVSIKLDDTNYLQWKQQVEGVLRGTKMVKFVISPEIPPVYLTDAAREA 520

Query: 110 DTVNQAYTTWEQQDSLLCTWLLSSISEGLLSKFV 9
            T N AYT WE+QDSLLCTW+LS+IS  LLS+FV
Sbjct: 521 GTENSAYTEWEEQDSLLCTWVLSTISPSLLSRFV 554


>gb|AFK48656.1| unknown [Lotus japonicus]
          Length = 219

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/94 (53%), Positives = 65/94 (69%)
 Frame = -1

Query: 284 PSSAPHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVPQIPPRYLTEEDRESDT 105
           P  +  +  + + +KLDD NFL WKQ VEG++R H+LQSFL  P+IPPR+L+E+DR +  
Sbjct: 26  PQLSSTSLVHKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRWLSEDDRVNAV 85

Query: 104 VNQAYTTWEQQDSLLCTWLLSSISEGLLSKFVTC 3
            N AY  WEQQDS L TWLLSS+S  +L   V C
Sbjct: 86  ENPAYQIWEQQDSALFTWLLSSLSPSVLPTVVNC 119


>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
          Length = 410

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = -1

Query: 266 TFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLL-VPQIPPRYLTEEDRESDTVNQAY 90
           +FS+ +S++LD+ NFL W++QV   IRGHKLQ+F+      P  +LT  D E D VN  +
Sbjct: 15  SFSHXVSIRLDNNNFLLWRKQVLTAIRGHKLQNFVFGTKPXPLXFLTLRDEEMDNVNPXF 74

Query: 89  TTWEQQDSLLCTWLLSSISEGLLSKFVTC 3
             WEQQD LL +WLLS +SEG+L+  V C
Sbjct: 75  LDWEQQDQLLLSWLLSXMSEGILTHMVNC 103


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 PHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVPQIPP-RYLTEEDRESDTVNQ 96
           P +F++S SVKL++ NFL W++Q+   IRGH LQ F++    P  ++ + EDR    VNQ
Sbjct: 18  PISFNHSTSVKLENHNFLIWRKQIFSAIRGHNLQHFVIGVHDPSLKFRSSEDRSQGIVNQ 77

Query: 95  AYTTWEQQDSLLCTWLLSSISEGLLSKFVTC 3
            +  WEQQD LL +WLLSS+ EG+LS+ + C
Sbjct: 78  DFLDWEQQDQLLVSWLLSSMFEGVLSRCINC 108


>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
          Length = 685

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -1

Query: 272 PHTFSYSISVKLDDKNFLQWKQQVEGVIRGHKLQSFLLVPQ-IPPRYLTEEDRESDTVNQ 96
           P +F++   VKLD+ NFL WKQQV   I+G+ LQ F+L    IPPR+L +E  ++  VN+
Sbjct: 11  PVSFTHYFLVKLDNNNFLIWKQQVVFAIKGYGLQRFVLFEYAIPPRFLLKEYAQAGNVNK 70

Query: 95  AYTTWEQQDSLLCTWLLSSISEGLLSK 15
           A+  WEQQD LL +WLLSSISE +L +
Sbjct: 71  AFVEWEQQDQLLLSWLLSSISEKVLPR 97


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