BLASTX nr result
ID: Glycyrrhiza23_contig00023200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00023200
(303 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago t... 160 1e-37
ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 159 2e-37
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,... 132 3e-29
ref|XP_003535261.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 127 9e-28
ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
>ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 772
Score = 160 bits (405), Expect = 1e-37
Identities = 75/96 (78%), Positives = 86/96 (89%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
ME+K ADVFTYNILA+GLCKLHRYDEAK LN+MVE+GV PNVVT T FIEI C+EGN
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGN 477
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKKEKL 3
+AEAER FRDME++GEVPN++TYNTLIDAYCKKEK+
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKV 513
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
ME+K ++ TYN L CK + +A + + M+ +G+ P++ T ++ I C G
Sbjct: 488 MEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGR 547
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKK 12
+ EA + F +M +G NV TY ++I K+
Sbjct: 548 VDEALKLFNEMRLKGITRNVATYTSMISGLSKE 580
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/96 (30%), Positives = 47/96 (48%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
M K E DV+ Y+ + S +L A + M +R + PN T I C+ G
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKKEKL 3
+ AE +M+ +G N+V +NT +D YC++ K+
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKM 408
>ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 159 bits (402), Expect = 2e-37
Identities = 76/96 (79%), Positives = 85/96 (88%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
MERK FEADVFTYNILASGLCKLHRY+EAKR LN MVE+GVAPNVVT TFIEI C+EGN
Sbjct: 383 MERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKKEKL 3
+AE ERF R++E+RG VPN+VTYNTLIDAY K EK+
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKV 478
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/92 (34%), Positives = 47/92 (51%)
Frame = -2
Query: 287 ERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGNI 108
ER V E DV+ Y + S C+ A + M+ RG+ PN T I C+ G +
Sbjct: 280 ERNV-EMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQM 338
Query: 107 AEAERFFRDMERRGEVPNVVTYNTLIDAYCKK 12
AE +M+ +G NVV +NT++D YCK+
Sbjct: 339 EAAEILLEEMQCKGVDLNVVIFNTMMDGYCKR 370
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/92 (36%), Positives = 43/92 (46%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
MER+ A + TY IL R EA++ M ER V +V T+ I C GN
Sbjct: 243 MEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGN 302
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCK 15
+ A F +M RG VPN T+ LI CK
Sbjct: 303 VRRASALFDEMICRGIVPNTXTFGALISGVCK 334
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
M K DVFTY L G C + + DEA + N M+ +G+ NV T T I +EG
Sbjct: 488 MVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGR 547
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCK 15
EA + + +M R G +P+ + L+ + K
Sbjct: 548 ADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579
>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 613
Score = 132 bits (332), Expect = 3e-29
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
ME+K FE D+FTYN +A GLCKL+R++EAKR L TMVE+GV PN V+ T I+I C+EGN
Sbjct: 416 MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKKEKL 3
+ EAER F+DM+++GE PNVVTYNTLID Y KK KL
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKL 511
Score = 58.2 bits (139), Expect = 7e-07
Identities = 33/93 (35%), Positives = 47/93 (50%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
+ER V EAD+ + + S CKL A + + ERG+ N T I C G
Sbjct: 312 LERGV-EADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQ 370
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCKK 12
+ AE +M+ +G N+V +NTLI+ YCKK
Sbjct: 371 LDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKK 403
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = -2
Query: 269 ADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGNIAEAERF 90
A+ TY L G C + D A+ +N M +G+ N+V T I C++G I EA R
Sbjct: 353 ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRM 412
Query: 89 FRDMERRGEVPNVVTYNTLIDAYCK 15
ME++G ++ TYNT+ CK
Sbjct: 413 QDVMEKKGFENDIFTYNTIAGGLCK 437
>ref|XP_003535261.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 514
Score = 127 bits (319), Expect = 9e-28
Identities = 63/97 (64%), Positives = 75/97 (77%)
Frame = -2
Query: 293 TMERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEG 114
TME K E DVF YNILAS LCKLH +EA R L MV++GVAPNV+T TTFIEI C+EG
Sbjct: 309 TMEGKRLEVDVFIYNILASWLCKLH--EEANRVLTVMVKKGVAPNVMTCTTFIEIYCKEG 366
Query: 113 NIAEAERFFRDMERRGEVPNVVTYNTLIDAYCKKEKL 3
N+AE ERF + ME+RG VPN+V Y+TLID Y + EK+
Sbjct: 367 NLAEVERFLKSMEKRGMVPNIVKYSTLIDXYSRNEKV 403
>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 124 bits (310), Expect = 1e-26
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = -2
Query: 302 LHWTMERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICC 123
L ME+K E+DVF YN +ASGLCKL+R DEAK L +MVERGV+PN ++ TT I+I C
Sbjct: 422 LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYC 481
Query: 122 EEGNIAEAERFFRDMERRGEVPNVVTYNTLIDAYCKK 12
+EGN EA+R FR+ME +G VPN++TYN LID Y K+
Sbjct: 482 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 518
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/92 (36%), Positives = 49/92 (53%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
ME K ++ TYN+L G K EA + + + RG+ P+V T T+ I C +G
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 555
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCK 15
+ A + F +M +RG VPNVVTY +I K
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
ME++ +V TY +L G + + +EA+R M E+G+ +V T+ I C GN
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCK 15
+ A F +M +G +P+ TY LI CK
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = -2
Query: 290 MERKVFEADVFTYNILASGLCKLHRYDEAKRALNTMVERGVAPNVVTSTTFIEICCEEGN 111
M K EADV+ Y + S C+ A + M ++G+ P+ T I C+ G
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 380
Query: 110 IAEAERFFRDMERRGEVPNVVTYNTLIDAYCK 15
+ A+ +M+ +G N V +NTLID YC+
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412