BLASTX nr result

ID: Glycyrrhiza23_contig00023199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023199
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   196   2e-48
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   153   2e-35
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   131   5e-29
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   131   5e-29
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   105   3e-21

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  196 bits (498), Expect = 2e-48
 Identities = 104/139 (74%), Positives = 118/139 (84%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1    MMMSTVAVHGFCFYAKHIADVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLS 180
            MMMSTVA HGFCFYAKHIA+ G KLG E+RVDITSEMLAST NIMALGKLSRQDH K  S
Sbjct: 997  MMMSTVAAHGFCFYAKHIAEAGPKLGFEDRVDITSEMLASTANIMALGKLSRQDHTKTTS 1056

Query: 181  NYNKKLLEANNPRNDKKSMQCHENRTSPFDVVRYIVPVRLS-MAMKGIAFNEYLSSLRQI 357
            +Y K+LLE N+ RND KS++C+E+RTS F+V+R IVP R S  A++GIAF+E LSSLRQI
Sbjct: 1057 SYTKELLEVNDQRND-KSLRCNESRTSLFNVIRSIVPARSSTTAIQGIAFSELLSSLRQI 1115

Query: 358  SISEGFRISHGVKKMRKGR 414
            SISE FRIS GVKKMRKGR
Sbjct: 1116 SISEDFRISQGVKKMRKGR 1134


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  153 bits (386), Expect = 2e-35
 Identities = 85/137 (62%), Positives = 99/137 (72%)
 Frame = +1

Query: 4    MMSTVAVHGFCFYAKHIADVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSN 183
            M ST+AVHGFCF+ K IADVGS LGC N++D+TSEMLASTTN MALGKLS  D  K    
Sbjct: 1103 MTSTIAVHGFCFFVKLIADVGSTLGCANKIDLTSEMLASTTNSMALGKLSGLDLAKSTGI 1162

Query: 184  YNKKLLEANNPRNDKKSMQCHENRTSPFDVVRYIVPVRLSMAMKGIAFNEYLSSLRQISI 363
            Y  K LE NNP N+ K     EN+ S F+VV+ IVP R+S+A+KG  FNEYLSSLRQIS 
Sbjct: 1163 YTGKELELNNPTNNMKK---SENKASLFEVVQSIVPARISLALKGDIFNEYLSSLRQISR 1219

Query: 364  SEGFRISHGVKKMRKGR 414
            SE   +S GV+K RK R
Sbjct: 1220 SEAACVSQGVEK-RKAR 1235


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  131 bits (330), Expect = 5e-29
 Identities = 76/138 (55%), Positives = 93/138 (67%)
 Frame = +1

Query: 1    MMMSTVAVHGFCFYAKHIADVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLS 180
            +M ST+A HGFCFYAK IAD  SKLGC N VDITSEMLAST       KL+ QD  +   
Sbjct: 1038 IMTSTIAEHGFCFYAKLIADEASKLGCANCVDITSEMLASTI------KLTGQDLARSKV 1091

Query: 181  NYNKKLLEANNPRNDKKSMQCHENRTSPFDVVRYIVPVRLSMAMKGIAFNEYLSSLRQIS 360
             Y  K +E N+P N+    Q  EN+TS F+ ++ IVP R+ +A+KG  FNEYLSSLRQIS
Sbjct: 1092 IYTGKQVEWNSPINNT---QKSENKTSQFEAIQSIVPARIYLALKGDVFNEYLSSLRQIS 1148

Query: 361  ISEGFRISHGVKKMRKGR 414
             +E  R S GV+K R+GR
Sbjct: 1149 RAEASRSSQGVEKKRRGR 1166


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  131 bits (330), Expect = 5e-29
 Identities = 79/138 (57%), Positives = 92/138 (66%)
 Frame = +1

Query: 1    MMMSTVAVHGFCFYAKHIADVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLS 180
            +M STVA HGFCFYAK IAD  SKLGC N VDITSEMLAS        KLS QD  K   
Sbjct: 1034 IMTSTVAEHGFCFYAKLIADEASKLGCANCVDITSEMLASAI------KLSGQDLTKSKV 1087

Query: 181  NYNKKLLEANNPRNDKKSMQCHENRTSPFDVVRYIVPVRLSMAMKGIAFNEYLSSLRQIS 360
             Y  K +E  +P N   S Q  EN+TS F  ++ IVP R+S+A+KG AFNEYLSSLR+I+
Sbjct: 1088 IYTGKEVEWKSPIN---STQKSENKTSQFKAIQSIVPARISLALKGGAFNEYLSSLREIT 1144

Query: 361  ISEGFRISHGVKKMRKGR 414
             SE  RIS  V+K R+GR
Sbjct: 1145 RSEASRISQEVEKNRRGR 1162


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
 Frame = +1

Query: 4    MMSTVAVHGFCFYAKHIADVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSN 183
            M ST+A HGFCFY+K+IA  GS LG +  VD+ SEMLASTTN MALGKL+R +    ++ 
Sbjct: 998  MASTIAQHGFCFYSKYIAAAGSILGSDYMVDLASEMLASTTNTMALGKLTRPEMR--MNW 1055

Query: 184  YNKKLLEANNPRNDKKSMQCHENRTSPFDVVRYIVPVRLSMAMKGIAFNEYLSSLRQISI 363
             ++K ++   P++D       E      ++V+ +VP +  + +KG AF+EYLSSL QIS 
Sbjct: 1056 TSRKGVQMEVPKSDISLRS--ETEPCLCNIVQSVVPSKSYLGVKGHAFHEYLSSLSQISR 1113

Query: 364  SEGFRISHGV--KKMRKGR 414
            SE  R+S  +   K R+GR
Sbjct: 1114 SEASRLSENINQNKRRRGR 1132


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