BLASTX nr result

ID: Glycyrrhiza23_contig00023140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023140
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...    67   2e-09
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...    63   2e-08
gb|AFK39437.1| unknown [Lotus japonicus]                               62   4e-08
ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding pr...    60   2e-07
ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding pr...    59   5e-07

>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = +1

Query: 43  KKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDNGLSKGFGF 222
           KKS+ I P P+A+YTNLY    +    ++T   K   F K   L  IA+D+NG+SKGFGF
Sbjct: 177 KKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNNGMSKGFGF 235

Query: 223 LDYDNVDDVGPAMEAIN 273
           ++YDN DD   AMEA+N
Sbjct: 236 VNYDNPDDAKKAMEAMN 252


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +1

Query: 43  KKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDNGLSKGFGF 222
           KKS+ I P P+A+YTNLY    +    ++T   K   F K   L  IA+D+ G+SKGFGF
Sbjct: 177 KKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNIGMSKGFGF 235

Query: 223 LDYDNVDDVGPAMEAIN 273
           ++YDN DD   AMEA+N
Sbjct: 236 VNYDNPDDAKRAMEAMN 252


>gb|AFK39437.1| unknown [Lotus japonicus]
          Length = 139

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
 Frame = +1

Query: 19  ICIREFVKKKSECIFPDPNAKYTNLY----D*EFEHRYYKS--TSLGKVLLFWKNY*LGS 180
           I +  FVKK SE I P P+A+YTNLY    D +      K   +S GK++         +
Sbjct: 37  IYVGRFVKK-SERILPGPDARYTNLYMKSLDLDITEALLKEKFSSFGKIVSL-------T 88

Query: 181 IARDDNGLSKGFGFLDYDNVDDVGPAMEAIN 273
           I++D+NG+SKGFGF++Y+N DD   A+EA++
Sbjct: 89  ISKDENGMSKGFGFVNYENSDDAKRALEAMD 119


>ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 495

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/85 (43%), Positives = 52/85 (61%)
 Frame = +1

Query: 19  ICIREFVKKKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDN 198
           I + +FV+K  + I P  +AKYTNLY    +    ++    K   F K   L +I++DDN
Sbjct: 170 IYVGKFVRK-GDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISL-AISKDDN 227

Query: 199 GLSKGFGFLDYDNVDDVGPAMEAIN 273
           GLSKGF F++Y+N DD   AMEA+N
Sbjct: 228 GLSKGFAFVNYENPDDAKKAMEAMN 252


>ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 502

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = +1

Query: 19  ICIREFVKKKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDN 198
           I + +FV+K  + I P  +AKYTNLY    +    ++    K   F K   L  I++DDN
Sbjct: 170 IYVGKFVRK-GDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISL-VISKDDN 227

Query: 199 GLSKGFGFLDYDNVDDVGPAMEAIN 273
           GLSKGF F++Y+N DD   AMEA+N
Sbjct: 228 GLSKGFAFVNYENPDDARKAMEAMN 252


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