BLASTX nr result
ID: Glycyrrhiza23_contig00023140
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00023140 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr... 67 2e-09 ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr... 63 2e-08 gb|AFK39437.1| unknown [Lotus japonicus] 62 4e-08 ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding pr... 60 2e-07 ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding pr... 59 5e-07 >ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 636 Score = 67.0 bits (162), Expect = 2e-09 Identities = 38/77 (49%), Positives = 50/77 (64%) Frame = +1 Query: 43 KKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDNGLSKGFGF 222 KKS+ I P P+A+YTNLY + ++T K F K L IA+D+NG+SKGFGF Sbjct: 177 KKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNNGMSKGFGF 235 Query: 223 LDYDNVDDVGPAMEAIN 273 ++YDN DD AMEA+N Sbjct: 236 VNYDNPDDAKKAMEAMN 252 >ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 632 Score = 63.2 bits (152), Expect = 2e-08 Identities = 37/77 (48%), Positives = 49/77 (63%) Frame = +1 Query: 43 KKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDNGLSKGFGF 222 KKS+ I P P+A+YTNLY + ++T K F K L IA+D+ G+SKGFGF Sbjct: 177 KKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNIGMSKGFGF 235 Query: 223 LDYDNVDDVGPAMEAIN 273 ++YDN DD AMEA+N Sbjct: 236 VNYDNPDDAKRAMEAMN 252 >gb|AFK39437.1| unknown [Lotus japonicus] Length = 139 Score = 62.4 bits (150), Expect = 4e-08 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 6/91 (6%) Frame = +1 Query: 19 ICIREFVKKKSECIFPDPNAKYTNLY----D*EFEHRYYKS--TSLGKVLLFWKNY*LGS 180 I + FVKK SE I P P+A+YTNLY D + K +S GK++ + Sbjct: 37 IYVGRFVKK-SERILPGPDARYTNLYMKSLDLDITEALLKEKFSSFGKIVSL-------T 88 Query: 181 IARDDNGLSKGFGFLDYDNVDDVGPAMEAIN 273 I++D+NG+SKGFGF++Y+N DD A+EA++ Sbjct: 89 ISKDENGMSKGFGFVNYENSDDAKRALEAMD 119 >ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 495 Score = 59.7 bits (143), Expect = 2e-07 Identities = 37/85 (43%), Positives = 52/85 (61%) Frame = +1 Query: 19 ICIREFVKKKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDN 198 I + +FV+K + I P +AKYTNLY + ++ K F K L +I++DDN Sbjct: 170 IYVGKFVRK-GDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISL-AISKDDN 227 Query: 199 GLSKGFGFLDYDNVDDVGPAMEAIN 273 GLSKGF F++Y+N DD AMEA+N Sbjct: 228 GLSKGFAFVNYENPDDAKKAMEAMN 252 >ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 502 Score = 58.5 bits (140), Expect = 5e-07 Identities = 37/85 (43%), Positives = 51/85 (60%) Frame = +1 Query: 19 ICIREFVKKKSECIFPDPNAKYTNLYD*EFEHRYYKSTSLGKVLLFWKNY*LGSIARDDN 198 I + +FV+K + I P +AKYTNLY + ++ K F K L I++DDN Sbjct: 170 IYVGKFVRK-GDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISL-VISKDDN 227 Query: 199 GLSKGFGFLDYDNVDDVGPAMEAIN 273 GLSKGF F++Y+N DD AMEA+N Sbjct: 228 GLSKGFAFVNYENPDDARKAMEAMN 252