BLASTX nr result
ID: Glycyrrhiza23_contig00023139
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00023139 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding pr... 86 7e-18 ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding pr... 84 3e-17 ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr... 82 6e-17 gb|AFK39437.1| unknown [Lotus japonicus] 83 6e-17 ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr... 79 2e-15 >ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 495 Score = 85.5 bits (210), Expect(2) = 7e-18 Identities = 41/53 (77%), Positives = 49/53 (92%) Frame = +3 Query: 105 NAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263 +AKYTNLYIKNL++DITEALL EKF SFGKIISLAI++DDNGLSK F F++Y+ Sbjct: 187 DAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYE 239 Score = 29.6 bits (65), Expect(2) = 7e-18 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 Query: 266 NVDDARWAMEAMSGSQFGN 322 N DDA+ AMEAM+G QFG+ Sbjct: 240 NPDDAKKAMEAMNGLQFGS 258 >ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 502 Score = 84.0 bits (206), Expect(2) = 3e-17 Identities = 40/53 (75%), Positives = 48/53 (90%) Frame = +3 Query: 105 NAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263 +AKYTNLYIKNL++DITEALL EKF SFGKIISL I++DDNGLSK F F++Y+ Sbjct: 187 DAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYE 239 Score = 29.3 bits (64), Expect(2) = 3e-17 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 Query: 266 NVDDARWAMEAMSGSQFGN 322 N DDAR AMEAM+G +FG+ Sbjct: 240 NPDDARKAMEAMNGLKFGS 258 >ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 636 Score = 82.0 bits (201), Expect(2) = 6e-17 Identities = 37/58 (63%), Positives = 49/58 (84%) Frame = +3 Query: 90 IFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263 I P+A+YTNLY+KNL+ D++EA L EKF SFGKI+SL IA+D+NG+SK FGF++YD Sbjct: 182 ILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYD 239 Score = 30.0 bits (66), Expect(2) = 6e-17 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNS 346 N DDA+ AMEAM+GSQ G+ + + + Sbjct: 240 NPDDAKKAMEAMNGSQLGSKILYVARA 266 >gb|AFK39437.1| unknown [Lotus japonicus] Length = 139 Score = 82.8 bits (203), Expect(2) = 6e-17 Identities = 38/60 (63%), Positives = 51/60 (85%) Frame = +3 Query: 84 EGIFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263 E I P+A+YTNLY+K+L+ DITEALL EKF SFGKI+SL I++D+NG+SK FGF++Y+ Sbjct: 47 ERILPGPDARYTNLYMKSLDLDITEALLKEKFSSFGKIVSLTISKDENGMSKGFGFVNYE 106 Score = 29.3 bits (64), Expect(2) = 6e-17 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNSFFC 355 N DDA+ A+EAM G+Q G+ SF+C Sbjct: 107 NSDDAKRALEAMDGTQLGSFFFA---SFYC 133 >ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like [Glycine max] Length = 632 Score = 78.6 bits (192), Expect(2) = 2e-15 Identities = 36/58 (62%), Positives = 48/58 (82%) Frame = +3 Query: 90 IFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263 I P+A+YTNLY+KNL+ D++EA L EKF SFGKI+SL IA+D+ G+SK FGF++YD Sbjct: 182 ILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYD 239 Score = 28.5 bits (62), Expect(2) = 2e-15 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +2 Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNS 346 N DDA+ AMEAM+GS+ G+ + + + Sbjct: 240 NPDDAKRAMEAMNGSKLGSKILYVARA 266