BLASTX nr result

ID: Glycyrrhiza23_contig00023139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023139
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding pr...    86   7e-18
ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding pr...    84   3e-17
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...    82   6e-17
gb|AFK39437.1| unknown [Lotus japonicus]                               83   6e-17
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...    79   2e-15

>ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 495

 Score = 85.5 bits (210), Expect(2) = 7e-18
 Identities = 41/53 (77%), Positives = 49/53 (92%)
 Frame = +3

Query: 105 NAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263
           +AKYTNLYIKNL++DITEALL EKF SFGKIISLAI++DDNGLSK F F++Y+
Sbjct: 187 DAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYE 239



 Score = 29.6 bits (65), Expect(2) = 7e-18
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 266 NVDDARWAMEAMSGSQFGN 322
           N DDA+ AMEAM+G QFG+
Sbjct: 240 NPDDAKKAMEAMNGLQFGS 258


>ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 502

 Score = 84.0 bits (206), Expect(2) = 3e-17
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = +3

Query: 105 NAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263
           +AKYTNLYIKNL++DITEALL EKF SFGKIISL I++DDNGLSK F F++Y+
Sbjct: 187 DAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYE 239



 Score = 29.3 bits (64), Expect(2) = 3e-17
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 266 NVDDARWAMEAMSGSQFGN 322
           N DDAR AMEAM+G +FG+
Sbjct: 240 NPDDARKAMEAMNGLKFGS 258


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score = 82.0 bits (201), Expect(2) = 6e-17
 Identities = 37/58 (63%), Positives = 49/58 (84%)
 Frame = +3

Query: 90  IFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263
           I   P+A+YTNLY+KNL+ D++EA L EKF SFGKI+SL IA+D+NG+SK FGF++YD
Sbjct: 182 ILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYD 239



 Score = 30.0 bits (66), Expect(2) = 6e-17
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNS 346
           N DDA+ AMEAM+GSQ G+ +  +  +
Sbjct: 240 NPDDAKKAMEAMNGSQLGSKILYVARA 266


>gb|AFK39437.1| unknown [Lotus japonicus]
          Length = 139

 Score = 82.8 bits (203), Expect(2) = 6e-17
 Identities = 38/60 (63%), Positives = 51/60 (85%)
 Frame = +3

Query: 84  EGIFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263
           E I   P+A+YTNLY+K+L+ DITEALL EKF SFGKI+SL I++D+NG+SK FGF++Y+
Sbjct: 47  ERILPGPDARYTNLYMKSLDLDITEALLKEKFSSFGKIVSLTISKDENGMSKGFGFVNYE 106



 Score = 29.3 bits (64), Expect(2) = 6e-17
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNSFFC 355
           N DDA+ A+EAM G+Q G+       SF+C
Sbjct: 107 NSDDAKRALEAMDGTQLGSFFFA---SFYC 133


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score = 78.6 bits (192), Expect(2) = 2e-15
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = +3

Query: 90  IFSHPNAKYTNLYIKNLNTDITEALL*EKFYSFGKIISLAIARDDNGLSKSFGFLDYD 263
           I   P+A+YTNLY+KNL+ D++EA L EKF SFGKI+SL IA+D+ G+SK FGF++YD
Sbjct: 182 ILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYD 239



 Score = 28.5 bits (62), Expect(2) = 2e-15
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 266 NVDDARWAMEAMSGSQFGNLLTTIVNS 346
           N DDA+ AMEAM+GS+ G+ +  +  +
Sbjct: 240 NPDDAKRAMEAMNGSKLGSKILYVARA 266