BLASTX nr result

ID: Glycyrrhiza23_contig00023123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023123
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    49   3e-07

>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 20/58 (34%), Positives = 36/58 (62%)
 Frame = +2

Query: 293 LRAELSALLFGLEAAWSQGVQRLLVYSDSALAIQKVTQGVSLHHLHGSLVRGIQDLLR 466
           L  E+S L  GL+  W  G++ ++ +SDS   +  V + +++HH +G+L+  I+ LLR
Sbjct: 120 LHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLR 177



 Score = 32.3 bits (72), Expect(2) = 3e-07
 Identities = 16/24 (66%), Positives = 16/24 (66%)
 Frame = +1

Query: 514 WSVELRHTWREGNFVADALAKKVA 585
           W V LRHT  EGN  AD LAKK A
Sbjct: 180 WVVSLRHTLCEGNAAADFLAKKGA 203


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