BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023122
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   221   2e-55
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   186   5e-45
gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula]         166   7e-39
ref|XP_003595573.1| Pentatricopeptide repeat-containing protein ...   166   7e-39
ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   158   1e-36

>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 504

 Score =  221 bits (562), Expect = 2e-55
 Identities = 129/227 (56%), Positives = 157/227 (69%), Gaps = 7/227 (3%)
 Frame = +1

Query: 139 MKRVWRLSSDAESLFSQILLSSS-------NPKSTTAAAIPNGFTRRHLNTLXXXXXXXS 297
           M+RVWR SSDA      +LL  S       NPK+T + A       R+LN++        
Sbjct: 1   MRRVWRFSSDATRRAQLLLLLQSHYFHGFSNPKTTPSLATALSH-HRNLNSVPNAC---- 55

Query: 298 PDTSFLVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILDENSDSLIRPF 477
              S L+ LFT K     S+KE+L+ KA++LKN+L+RE+SDS R L ILD+NSD+LI+  
Sbjct: 56  ---SDLIPLFTAKS--CSSAKEDLINKASILKNELIRESSDSARVLSILDDNSDTLIQRH 110

Query: 478 PGGSVLLELLNQLDYWPSLALKVFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRNVELA 657
           P GSVLL L+NQL+  PSLAL+VF WRRKR+  +  NPM  YEYSK IKAAGRS NV+LA
Sbjct: 111 PDGSVLLRLMNQLNSNPSLALQVFSWRRKRSNVE--NPMDAYEYSKGIKAAGRSGNVDLA 168

Query: 658 VELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 798
           V+LFKEAA KG+KTTSTYNALMGA M NGLAD C SLF DLK+D TC
Sbjct: 169 VKLFKEAAVKGIKTTSTYNALMGACMSNGLADNCQSLFCDLKRDPTC 215


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 442

 Score =  186 bits (472), Expect = 5e-45
 Identities = 94/145 (64%), Positives = 115/145 (79%)
 Frame = +1

Query: 364 ELVVKATVLKNKLVREASDSVRFLHILDENSDSLIRPFPGGSVLLELLNQLDYWPSLALK 543
           +L+ K T+LKN+L+R++ DS R   ILD++ D+L R  P GS LL+L+NQL+  PSLAL+
Sbjct: 10  DLINKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQ 69

Query: 544 VFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRNVELAVELFKEAASKGVKTTSTYNALM 723
           VF WRRKR+  +A NPM  YEYSK IKAAGRS NV+LAV+LFKEAA KG+KTT TYNALM
Sbjct: 70  VFSWRRKRS--NAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALM 127

Query: 724 GAFMYNGLADRCHSLFLDLKKDATC 798
           GAFM+NGL D C SLF DLK+D TC
Sbjct: 128 GAFMFNGLPDNCQSLFCDLKRDLTC 152


>gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 514

 Score =  166 bits (419), Expect = 7e-39
 Identities = 113/240 (47%), Positives = 138/240 (57%), Gaps = 20/240 (8%)
 Frame = +1

Query: 139 MKRVWR--LSSDAESLFSQILLSSSNPKSTTAAAIPNGFTRRHLNTLXXXXXXXSPDTSF 312
           MK  WR  L +   S F+Q L + SNP  T      N  T ++ N +        P TS 
Sbjct: 1   MKHFWRFTLKASKSSKFNQ-LHTLSNP--TFIKRYSNSNTPQNPNKVLDLVSFLKPSTSI 57

Query: 313 ---------------LVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILD 447
                          LVSLF       P ++E+   K  +L   L+  ASDSV    ILD
Sbjct: 58  PNPESTEQIPNQALDLVSLFK------PLNQED---KVAILVKDLICVASDSVSVTSILD 108

Query: 448 ENSDSLIRPFPGGSVLLELLNQLDYWPSLALKVFDWRRKRN---GFDAGNPMIVYEYSKS 618
           ENS+ LI   P   V ++LLNQLD  PSL L+V +WRRKR         N M  +EYSK 
Sbjct: 109 ENSEFLIGSHP---VYIQLLNQLDSKPSLLLEVINWRRKRKVSFSDACRNSMQAHEYSKG 165

Query: 619 IKAAGRSRNVELAVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 798
           IKAAGRSRN++LAV LFKEA  KGVK TSTYNALMGA+M+NGL+D+C+SLFLD+KKD TC
Sbjct: 166 IKAAGRSRNIDLAVALFKEAEFKGVKITSTYNALMGAYMFNGLSDKCYSLFLDMKKDPTC 225


>ref|XP_003595573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484621|gb|AES65824.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 621

 Score =  166 bits (419), Expect = 7e-39
 Identities = 113/240 (47%), Positives = 138/240 (57%), Gaps = 20/240 (8%)
 Frame = +1

Query: 139 MKRVWR--LSSDAESLFSQILLSSSNPKSTTAAAIPNGFTRRHLNTLXXXXXXXSPDTSF 312
           MK  WR  L +   S F+Q L + SNP  T      N  T ++ N +        P TS 
Sbjct: 1   MKHFWRFTLKASKSSKFNQ-LHTLSNP--TFIKRYSNSNTPQNPNKVLDLVSFLKPSTSI 57

Query: 313 ---------------LVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILD 447
                          LVSLF       P ++E+   K  +L   L+  ASDSV    ILD
Sbjct: 58  PNPESTEQIPNQALDLVSLFK------PLNQED---KVAILVKDLICVASDSVSVTSILD 108

Query: 448 ENSDSLIRPFPGGSVLLELLNQLDYWPSLALKVFDWRRKRN---GFDAGNPMIVYEYSKS 618
           ENS+ LI   P   V ++LLNQLD  PSL L+V +WRRKR         N M  +EYSK 
Sbjct: 109 ENSEFLIGSHP---VYIQLLNQLDSKPSLLLEVINWRRKRKVSFSDACRNSMQAHEYSKG 165

Query: 619 IKAAGRSRNVELAVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 798
           IKAAGRSRN++LAV LFKEA  KGVK TSTYNALMGA+M+NGL+D+C+SLFLD+KKD TC
Sbjct: 166 IKAAGRSRNIDLAVALFKEAEFKGVKITSTYNALMGAYMFNGLSDKCYSLFLDMKKDPTC 225


>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
           [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
           protein product [Vitis vinifera]
          Length = 494

 Score =  158 bits (400), Expect = 1e-36
 Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
 Frame = +1

Query: 313 LVSLFTVKHSPAP-SSKEELVVKATVLKNKLVREASDSVRFLHILDENSDSLIRPFPGGS 489
           ++ LF+ KHS     ++EEL  K + L+++LV    DS   + +L+E  +SL R +  GS
Sbjct: 43  MIGLFSDKHSELDLRAREELRGKVSQLRDELVPSGDDSDMVVRVLEEKGESLFRSYSNGS 102

Query: 490 VLLELLNQLDYWPSLALKVFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRNVELAVELF 669
             +ELL QL  WP LAL+VF+WRR  N  D   PM   EY+K I  AGR++NV+LAVELF
Sbjct: 103 AFVELLKQLSSWPYLALQVFNWRR--NQTDYSIPMTSEEYAKGISVAGRTKNVDLAVELF 160

Query: 670 KEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 798
            EAA+K +KTTSTYNALMGA+M NG A++C +LF DLK++A+C
Sbjct: 161 TEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASC 203