BLASTX nr result
ID: Glycyrrhiza23_contig00023095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00023095
(925 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 110 1e-28
gb|AFK36982.1| unknown [Medicago truncatula] 110 1e-28
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 91 2e-23
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula] 91 2e-23
ref|XP_003625085.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 69 1e-13
>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 499
Score = 110 bits (274), Expect(2) = 1e-28
Identities = 58/110 (52%), Positives = 73/110 (66%)
Frame = -2
Query: 894 KWILYLSRSGIKELVLVVEQESPNPMPSHVFSCHELTFLQLLCVRLSVAPNFCCFKSLLE 715
KWIL+LSR G+K + L + P +PSH FS +LT +++ +L V PNFC FKSL+
Sbjct: 195 KWILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVH 254
Query: 714 LHLYNMYFEPGVLESLISVCPVLEKLTILCSSGIERIDFPAPTLKFANIE 565
H M FE G LESLIS CP+LE+L I+ SGIE ID APTLK +IE
Sbjct: 255 FHFERMTFEFGALESLISGCPLLEELYIVNCSGIECIDLSAPTLKVFSIE 304
Score = 43.1 bits (100), Expect(2) = 1e-28
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = -1
Query: 553 LKSCCLKKAKNLIDLKLSAGWDNEERVSASDLIKGLPKVQRLAMG 419
+KS CL+KAKNLIDL L D S L K LP++QRL MG
Sbjct: 309 IKSICLEKAKNLIDLTLVLNQD-----GVSSLNKNLPEIQRLTMG 348
Score = 57.0 bits (136), Expect = 6e-06
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = -3
Query: 212 EMSECSGCCLSQLQTVNIKVKLESTLYAMNLMRSILANSSSLKTLTVEVGSFDGLTDGPL 33
E ECS CCL QL VNIKV+ + M+L+R ILANSSSLKTLT+ V +D P+
Sbjct: 419 EELECSSCCLRQLLIVNIKVR-SYFKHVMSLIRFILANSSSLKTLTLNVHRSHNKSDVPI 477
Query: 32 L 30
L
Sbjct: 478 L 478
>gb|AFK36982.1| unknown [Medicago truncatula]
Length = 418
Score = 110 bits (274), Expect(2) = 1e-28
Identities = 58/110 (52%), Positives = 73/110 (66%)
Frame = -2
Query: 894 KWILYLSRSGIKELVLVVEQESPNPMPSHVFSCHELTFLQLLCVRLSVAPNFCCFKSLLE 715
KWIL+LSR G+K + L + P +PSH FS +LT +++ +L V PNFC FKSL+
Sbjct: 114 KWILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVH 173
Query: 714 LHLYNMYFEPGVLESLISVCPVLEKLTILCSSGIERIDFPAPTLKFANIE 565
H M FE G LESLIS CP+LE+L I+ SGIE ID APTLK +IE
Sbjct: 174 FHFERMTFEFGALESLISGCPLLEELYIVNCSGIECIDLSAPTLKVFSIE 223
Score = 43.1 bits (100), Expect(2) = 1e-28
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = -1
Query: 553 LKSCCLKKAKNLIDLKLSAGWDNEERVSASDLIKGLPKVQRLAMG 419
+KS CL+KAKNLIDL L D S L K LP++QRL MG
Sbjct: 228 IKSICLEKAKNLIDLTLVLNQD-----GVSSLNKNLPEIQRLTMG 267
Score = 57.0 bits (136), Expect = 6e-06
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = -3
Query: 212 EMSECSGCCLSQLQTVNIKVKLESTLYAMNLMRSILANSSSLKTLTVEVGSFDGLTDGPL 33
E ECS CCL QL VNIKV+ + M+L+R ILANSSSLKTLT+ V +D P+
Sbjct: 338 EELECSSCCLRQLLIVNIKVR-SYFKHVMSLIRFILANSSSLKTLTLNVHRSHNKSDVPI 396
Query: 32 L 30
L
Sbjct: 397 L 397
>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 432
Score = 90.9 bits (224), Expect(2) = 2e-23
Identities = 57/130 (43%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = -2
Query: 915 IGIERLNKWILYLSRSGIKELVLVVEQESPNPMPSHV-FSCHELTFLQLLCVRLSVAPNF 739
I IE L+KWI LS IK L LV + P+ M V C ELT+ + L LS+ P+F
Sbjct: 104 ITIEHLDKWIPILSERNIKHLELVNHETHPDQMLYIVDLPCKELTYSKFLGFDLSIPPDF 163
Query: 738 CCFKSLLELHLYNMYFEPGVLESLISVCPVLEKLTILCSSGIERIDFPAPTLKFANIETN 559
F+ LLELHL + FEPG ESLIS CP+L+ L + E DF PTL+ IE N
Sbjct: 164 SGFERLLELHLLFVRFEPGAFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLIEFN 223
Query: 558 WFSSHVVSKK 529
+ KK
Sbjct: 224 PKMKSICLKK 233
Score = 45.4 bits (106), Expect(2) = 2e-23
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = -1
Query: 553 LKSCCLKKAKNLIDLKLSAGWDNEERVSASDLIKGLPK-VQRLAMGSH--YMKILSAGTI 383
+KS CLKKA NLIDL L A LIK LPK +QRL++ S K+ A I
Sbjct: 226 MKSICLKKANNLIDLALKA-----TESCTFGLIKSLPKNIQRLSISSRRGIYKMQYANII 280
Query: 382 PQLLLRRAFSSLEGMK 335
LL+ +FSS++ +K
Sbjct: 281 HPTLLKSSFSSMKYLK 296
>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
Length = 430
Score = 90.9 bits (224), Expect(2) = 2e-23
Identities = 57/130 (43%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = -2
Query: 915 IGIERLNKWILYLSRSGIKELVLVVEQESPNPMPSHV-FSCHELTFLQLLCVRLSVAPNF 739
I IE L+KWI LS IK L LV + P+ M V C ELT+ + L LS+ P+F
Sbjct: 104 ITIEHLDKWIPILSERNIKHLELVNHETHPDQMLYIVDLPCKELTYSKFLGFDLSIPPDF 163
Query: 738 CCFKSLLELHLYNMYFEPGVLESLISVCPVLEKLTILCSSGIERIDFPAPTLKFANIETN 559
F+ LLELHL + FEPG ESLIS CP+L+ L + E DF PTL+ IE N
Sbjct: 164 SGFERLLELHLLFVRFEPGAFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLIEFN 223
Query: 558 WFSSHVVSKK 529
+ KK
Sbjct: 224 PKMKSICLKK 233
Score = 45.4 bits (106), Expect(2) = 2e-23
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = -1
Query: 553 LKSCCLKKAKNLIDLKLSAGWDNEERVSASDLIKGLPK-VQRLAMGSHYMKILSAGTIPQ 377
+KS CLKKA NLIDL L A LIK LPK +QRL++ S A I
Sbjct: 226 MKSICLKKANNLIDLALKA-----TESCTFGLIKSLPKNIQRLSISSRRGIYKYANIIHP 280
Query: 376 LLLRRAFSSLEGMK 335
LL+ +FSS++ +K
Sbjct: 281 TLLKSSFSSMKYLK 294
>ref|XP_003625085.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355500100|gb|AES81303.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 410
Score = 68.9 bits (167), Expect(2) = 1e-13
Identities = 48/130 (36%), Positives = 61/130 (46%)
Frame = -2
Query: 918 RIGIERLNKWILYLSRSGIKELVLVVEQESPNPMPSHVFSCHELTFLQLLCVRLSVAPNF 739
+I IE L+ WI +LSR IK L L+ + MP V +C
Sbjct: 119 KIIIEFLSTWIPFLSRRDIKHLELLNYGTHVDQMPYTVLAC------------------- 159
Query: 738 CCFKSLLELHLYNMYFEPGVLESLISVCPVLEKLTILCSSGIERIDFPAPTLKFANIETN 559
FK LL LHL N+ FE G LE LIS CP+LEKL+I G E D TLK ++ +
Sbjct: 160 --FKRLLNLHLSNVTFESGALEGLISGCPLLEKLSIQFCEGFEYFDISVTTLKVLLLQFH 217
Query: 558 WFSSHVVSKK 529
+ KK
Sbjct: 218 QEMKSICLKK 227
Score = 33.9 bits (76), Expect(2) = 1e-13
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Frame = -1
Query: 553 LKSCCLKKAKNLIDLKLSAG------WDNEE--RVSASDLIKGLPKVQRLAMGSHYMKIL 398
+KS CLKKA NLIDL L A W +++ + + + + ++ Y
Sbjct: 220 MKSICLKKAINLIDLTLKATNGCVCIWFDQKFTKKHSKAFYWSMTRCLQVKREMQY---- 275
Query: 397 SAGTIPQLLLRRAFSSLEGMK 335
A IPQ LL+ +FSS++ +K
Sbjct: 276 -ANIIPQTLLKSSFSSMKYLK 295