BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023084
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   512   e-143
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   378   e-102
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              378   e-102
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   355   1e-95
dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]      314   2e-83

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  512 bits (1318), Expect = e-143
 Identities = 271/373 (72%), Positives = 293/373 (78%), Gaps = 38/373 (10%)
 Frame = -3

Query: 1006 KNYQWTIEDEK--------------------------------------VLSFKVAESLR 941
            KNYQW+IEDEK                                      VLSFKVAE+L 
Sbjct: 1259 KNYQWSIEDEKTTEMEYCKLHKTCAASNGTANYQLSDYLPCIYHQAVTIVLSFKVAETLH 1318

Query: 940  GEKKYETASKESQVGGYFDENDLGFINVLYGRSAGKTNVAVSFSCELSTSGSKTRSRLYS 761
             +    TAS  SQV  YFD+NDLGFINVLYGRSAGKTNVAVSFSCELSTSGS+T+SR YS
Sbjct: 1319 EDSIQLTASAGSQVNSYFDDNDLGFINVLYGRSAGKTNVAVSFSCELSTSGSRTQSRFYS 1378

Query: 760  SSLSVTVVPDLALALGVPITWIXXXXXXXXXXXXXXXXXXTQYDSQSHKGTIKYSLLRSL 581
            SSLSVTV+PDL LALGVPITWI                  +Q DS++ +GTI YSLLRSL
Sbjct: 1379 SSLSVTVIPDLPLALGVPITWILPPYYTMTSPLPSSSESHSQNDSRNRRGTISYSLLRSL 1438

Query: 580  EKNAALQKDAMFIDGDRIKTTESNNLACIQAKDRTTGRIEIASCVKVAEVTQIRIASKEV 401
            EKN ALQKDA+FID DRIKTT+SNNLACIQAKDRTTGR EIASCVKVAEVTQIRIASKEV
Sbjct: 1439 EKNEALQKDAIFIDADRIKTTKSNNLACIQAKDRTTGRTEIASCVKVAEVTQIRIASKEV 1498

Query: 400  LLKVIDLAVGAELDLPTTFYDALGNPFYEAYNAVPFYAETNYPDVLWMNKTADGKGNVHI 221
            LL +I+LAVGAELDLPT+FYDALGNPF+EAYNAVPFYAETNYPDVL +NKTADGKGNVHI
Sbjct: 1499 LLNIINLAVGAELDLPTSFYDALGNPFHEAYNAVPFYAETNYPDVLCVNKTADGKGNVHI 1558

Query: 220  KAIRHGKALVRIAIREGLQKSDYMLIRVGAHIYPQNPVLHIGSPLNLSIKGLSDNVSGQW 41
            KAI+HGKALVR+AI E LQKSDY+LIRVGAHIYPQNPVLHIGSPLNLSIKGLSD +SGQW
Sbjct: 1559 KAIQHGKALVRVAISEDLQKSDYVLIRVGAHIYPQNPVLHIGSPLNLSIKGLSDTISGQW 1618

Query: 40   FTTNGSVISVDAL 2
            FTTNGSVISVD L
Sbjct: 1619 FTTNGSVISVDTL 1631


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  378 bits (971), Expect = e-102
 Identities = 196/338 (57%), Positives = 248/338 (73%), Gaps = 3/338 (0%)
 Frame = -3

Query: 1006 KNYQWTIEDEKVLSFKVAESLRGEKKY--ETASKESQVGGYFDENDLGFINVLYGRSAGK 833
            KNY+WT+EDEKVLSF +AE +RG++     + SKE ++ G+ DE DLGFIN+LYGRSAG+
Sbjct: 1352 KNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPGHLDEKDLGFINMLYGRSAGR 1411

Query: 832  TNVAVSFSCELSTSGSKTRSRLYSSSLSVTVVPDLALALGVPITWIXXXXXXXXXXXXXX 653
            T VAVSF+C+  +SG  ++SR YS+S+S++VV +L LA GVPITW+              
Sbjct: 1412 TTVAVSFNCDFISSGH-SQSRSYSASMSISVVSELPLAFGVPITWVLPPYYTTSSLLPSS 1470

Query: 652  XXXXTQYDSQSHKGTIKYSLLRSLE-KNAALQKDAMFIDGDRIKTTESNNLACIQAKDRT 476
                 Q+D  S KGTI YSLLRS   KN  +QKDA+ ID DRIKTTESNNLACIQAKDRT
Sbjct: 1471 SESYGQWDL-SRKGTITYSLLRSCGGKNEEVQKDAISIDRDRIKTTESNNLACIQAKDRT 1529

Query: 475  TGRIEIASCVKVAEVTQIRIASKEVLLKVIDLAVGAELDLPTTFYDALGNPFYEAYNAVP 296
            TG+  IASCV+VAEV QIRI  ++    VIDLAV AE+ LP  F D LGNPF+EA+N +P
Sbjct: 1530 TGKTGIASCVRVAEVAQIRITPQKFSFHVIDLAVDAEVKLPINFCDVLGNPFHEAFNVIP 1589

Query: 295  FYAETNYPDVLWMNKTADGKGNVHIKAIRHGKALVRIAIREGLQKSDYMLIRVGAHIYPQ 116
              AETNYPD++ +N T DG GN+H+K IRHG+AL+R++I     KSDY+L+ VGA++ P+
Sbjct: 1590 LDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALLRVSINSSPHKSDYVLVSVGAYLSPR 1649

Query: 115  NPVLHIGSPLNLSIKGLSDNVSGQWFTTNGSVISVDAL 2
            NPVLH+G  LN SI+GL D VSGQW + N SVIS+D L
Sbjct: 1650 NPVLHLGGHLNFSIEGLKDKVSGQWLSGNESVISLDVL 1687


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  378 bits (971), Expect = e-102
 Identities = 196/338 (57%), Positives = 248/338 (73%), Gaps = 3/338 (0%)
 Frame = -3

Query: 1006 KNYQWTIEDEKVLSFKVAESLRGEKKY--ETASKESQVGGYFDENDLGFINVLYGRSAGK 833
            KNY+WT+EDEKVLSF +AE +RG++     + SKE ++ G+ DE DLGFIN+LYGRSAG+
Sbjct: 1277 KNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPGHLDEKDLGFINMLYGRSAGR 1336

Query: 832  TNVAVSFSCELSTSGSKTRSRLYSSSLSVTVVPDLALALGVPITWIXXXXXXXXXXXXXX 653
            T VAVSF+C+  +SG  ++SR YS+S+S++VV +L LA GVPITW+              
Sbjct: 1337 TTVAVSFNCDFISSGH-SQSRSYSASMSISVVSELPLAFGVPITWVLPPYYTTSSLLPSS 1395

Query: 652  XXXXTQYDSQSHKGTIKYSLLRSLE-KNAALQKDAMFIDGDRIKTTESNNLACIQAKDRT 476
                 Q+D  S KGTI YSLLRS   KN  +QKDA+ ID DRIKTTESNNLACIQAKDRT
Sbjct: 1396 SESYGQWDL-SRKGTITYSLLRSCGGKNEEVQKDAISIDRDRIKTTESNNLACIQAKDRT 1454

Query: 475  TGRIEIASCVKVAEVTQIRIASKEVLLKVIDLAVGAELDLPTTFYDALGNPFYEAYNAVP 296
            TG+  IASCV+VAEV QIRI  ++    VIDLAV AE+ LP  F D LGNPF+EA+N +P
Sbjct: 1455 TGKTGIASCVRVAEVAQIRITPQKFSFHVIDLAVDAEVKLPINFCDVLGNPFHEAFNVIP 1514

Query: 295  FYAETNYPDVLWMNKTADGKGNVHIKAIRHGKALVRIAIREGLQKSDYMLIRVGAHIYPQ 116
              AETNYPD++ +N T DG GN+H+K IRHG+AL+R++I     KSDY+L+ VGA++ P+
Sbjct: 1515 LDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALLRVSINSSPHKSDYVLVSVGAYLSPR 1574

Query: 115  NPVLHIGSPLNLSIKGLSDNVSGQWFTTNGSVISVDAL 2
            NPVLH+G  LN SI+GL D VSGQW + N SVIS+D L
Sbjct: 1575 NPVLHLGGHLNFSIEGLKDKVSGQWLSGNESVISLDVL 1612


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  355 bits (910), Expect = 1e-95
 Identities = 188/334 (56%), Positives = 238/334 (71%), Gaps = 1/334 (0%)
 Frame = -3

Query: 1006 KNYQWTIEDEKVLSFKVAESLRGEKKYETASKESQVGGYFDENDLGFINVLYGRSAGKTN 827
            K Y+WT++DEKVL F  A  L GEK +   +         DE +LGF+ VLYGRSAG+T+
Sbjct: 1266 KKYKWTVDDEKVLDFYKAGGLHGEKNWLQLN---------DEKELGFMKVLYGRSAGRTS 1316

Query: 826  VAVSFSCE-LSTSGSKTRSRLYSSSLSVTVVPDLALALGVPITWIXXXXXXXXXXXXXXX 650
            VAVSFSC+ +STS S+TR  LY +S+S+ VVP L LALG+PITWI               
Sbjct: 1317 VAVSFSCDFVSTSYSETR--LYDASISLLVVPYLPLALGLPITWILPPHYITSSILPSSL 1374

Query: 649  XXXTQYDSQSHKGTIKYSLLRSLEKNAALQKDAMFIDGDRIKTTESNNLACIQAKDRTTG 470
                Q+D QSHKG I YSLLRS EKN    KDA+ IDGDRIKT ESNNLACIQ KDRTTG
Sbjct: 1375 ESHGQWDGQSHKGIITYSLLRSCEKNEGWHKDAISIDGDRIKTMESNNLACIQGKDRTTG 1434

Query: 469  RIEIASCVKVAEVTQIRIASKEVLLKVIDLAVGAELDLPTTFYDALGNPFYEAYNAVPFY 290
            R+EIASCV+VAEV QIRI +KE    VI +AV  ELDL  +++DALGNPFYEA+NAV ++
Sbjct: 1435 RVEIASCVRVAEVAQIRITNKEFPFHVIHVAVNTELDLSISYFDALGNPFYEAHNAVSYH 1494

Query: 289  AETNYPDVLWMNKTADGKGNVHIKAIRHGKALVRIAIREGLQKSDYMLIRVGAHIYPQNP 110
            AETNY D++ ++ T      +H+KA+R+G+AL+R++ ++  QKSD++LI VGA+I+PQNP
Sbjct: 1495 AETNYHDIVSIDDTKTDSEKIHLKALRYGRALLRVSFKDNQQKSDFILISVGANIFPQNP 1554

Query: 109  VLHIGSPLNLSIKGLSDNVSGQWFTTNGSVISVD 8
            VLH GS L+ SI+G    VSG W + N SVIS+D
Sbjct: 1555 VLHQGSSLHFSIEG--SQVSGHWLSANESVISID 1586


>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score =  314 bits (804), Expect = 2e-83
 Identities = 160/331 (48%), Positives = 222/331 (67%)
 Frame = -3

Query: 1000 YQWTIEDEKVLSFKVAESLRGEKKYETASKESQVGGYFDENDLGFINVLYGRSAGKTNVA 821
            Y+WTIEDEKVL F +A S+  E+                  + GF+NV+ GRSAGKT V 
Sbjct: 1277 YKWTIEDEKVLIF-IASSINVEE------------------NAGFVNVVQGRSAGKTRVT 1317

Query: 820  VSFSCELSTSGSKTRSRLYSSSLSVTVVPDLALALGVPITWIXXXXXXXXXXXXXXXXXX 641
            ++FSC+  + G  + SR Y +S+ ++VVPDL L+LG P+TW+                  
Sbjct: 1318 IAFSCDFVSPGLYSESRTYEASMILSVVPDLPLSLGAPMTWVLPPFYTSSGLLPSSSEPQ 1377

Query: 640  TQYDSQSHKGTIKYSLLRSLEKNAALQKDAMFIDGDRIKTTESNNLACIQAKDRTTGRIE 461
               D QSH+G I YS+L+     A  ++D + I+G  +KTT+SNN+ACIQAKDRT+GRIE
Sbjct: 1378 KHRDGQSHRGNIVYSILKDCSSRADFERDTISINGGSVKTTDSNNVACIQAKDRTSGRIE 1437

Query: 460  IASCVKVAEVTQIRIASKEVLLKVIDLAVGAELDLPTTFYDALGNPFYEAYNAVPFYAET 281
            IA+CV+VAEV QIR+ S+ +   VIDLAVG EL+LP  +YD LG PF EA+    +  ET
Sbjct: 1438 IAACVRVAEVAQIRMKSEGIPFHVIDLAVGGELELPINYYDTLGIPFLEAHGVTTYNVET 1497

Query: 280  NYPDVLWMNKTADGKGNVHIKAIRHGKALVRIAIREGLQKSDYMLIRVGAHIYPQNPVLH 101
            N+ DV+++ KT + + + +IK I+HGKAL+R++I + L+KSDY+L+ VGAHI+PQNPV+H
Sbjct: 1498 NHRDVVFI-KTVNDQPSAYIKGIKHGKALIRVSIGDNLRKSDYVLVSVGAHIFPQNPVIH 1556

Query: 100  IGSPLNLSIKGLSDNVSGQWFTTNGSVISVD 8
             G+ LN SI G  + V+GQWFT+N SVISV+
Sbjct: 1557 TGNLLNFSITGADNEVTGQWFTSNRSVISVN 1587