BLASTX nr result

ID: Glycyrrhiza23_contig00023053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023053
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601844.1| Chloroplast small heat shock protein [Medica...   203   1e-50
ref|XP_003552791.1| PREDICTED: small heat shock protein, chlorop...   200   1e-49
ref|XP_003538574.1| PREDICTED: small heat shock protein, chlorop...   199   3e-49
gb|ACU20181.1| unknown [Glycine max]                                  196   1e-48
gb|ADQ08650.1| chloroplast small heat shock protein 1 [Potentill...   179   2e-43

>ref|XP_003601844.1| Chloroplast small heat shock protein [Medicago truncatula]
           gi|355490892|gb|AES72095.1| Chloroplast small heat shock
           protein [Medicago truncatula]
          Length = 221

 Score =  203 bits (517), Expect = 1e-50
 Identities = 104/123 (84%), Positives = 107/123 (86%)
 Frame = -2

Query: 487 PSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKK 308
           PSSPLP EGVGGYRRRGRTPWEIKEGE EYKMRFDMPGMNKEDVKVWVEEKMLVVKAEK 
Sbjct: 101 PSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKA 160

Query: 307 AHMNDDDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKAVYSSNILDI 128
               +D+D E WS KSYGRYSSRIALPENVQ ENIKAEVKDGVLYITIPKA   S +LDI
Sbjct: 161 PKKKNDED-EEWS-KSYGRYSSRIALPENVQFENIKAEVKDGVLYITIPKATTYSKVLDI 218

Query: 127 HVQ 119
            VQ
Sbjct: 219 SVQ 221


>ref|XP_003552791.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 171

 Score =  200 bits (508), Expect = 1e-49
 Identities = 104/130 (80%), Positives = 109/130 (83%), Gaps = 7/130 (5%)
 Frame = -2

Query: 487 PSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAE-- 314
           PSSPLPSEGVGGYRRRGR PWEI+E EGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAE  
Sbjct: 42  PSSPLPSEGVGGYRRRGRAPWEIEECEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKA 101

Query: 313 -KKAHMND----DDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKAVY 149
            KK   N+      + E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDGVLYITIPKA+ 
Sbjct: 102 PKKKQENEIVELQQEEEEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYITIPKAIS 161

Query: 148 SSNILDIHVQ 119
            S ILDI VQ
Sbjct: 162 YSCILDIQVQ 171


>ref|XP_003538574.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 235

 Score =  199 bits (505), Expect = 3e-49
 Identities = 102/134 (76%), Positives = 106/134 (79%), Gaps = 11/134 (8%)
 Frame = -2

Query: 487 PSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEK- 311
           PSSPLPSEGVGGYRRRGR PWEIKE E EYKMRFDMPGMNKEDVKVWVEEKMLVVKAEK 
Sbjct: 102 PSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKA 161

Query: 310 ----------KAHMNDDDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIP 161
                     +       + E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDG+LYITIP
Sbjct: 162 QKKKQENEIVELQQEKQQEEEEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIP 221

Query: 160 KAVYSSNILDIHVQ 119
           KA   SNILDI VQ
Sbjct: 222 KATSYSNILDIQVQ 235


>gb|ACU20181.1| unknown [Glycine max]
          Length = 235

 Score =  196 bits (499), Expect = 1e-48
 Identities = 101/134 (75%), Positives = 105/134 (78%), Gaps = 11/134 (8%)
 Frame = -2

Query: 487 PSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEK- 311
           PSSPLPSEGVGGYRRRGR PWEIKE E EYKMRFD PGMNKEDVKVWVEEKMLVVKAEK 
Sbjct: 102 PSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDTPGMNKEDVKVWVEEKMLVVKAEKA 161

Query: 310 ----------KAHMNDDDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIP 161
                     +       + E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDG+LYITIP
Sbjct: 162 QKKKQENEIVELQQEKQQEEEEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIP 221

Query: 160 KAVYSSNILDIHVQ 119
           KA   SNILDI VQ
Sbjct: 222 KATSYSNILDIQVQ 235


>gb|ADQ08650.1| chloroplast small heat shock protein 1 [Potentilla discolor]
           gi|311779822|gb|ADQ08651.1| chloroplast small heat shock
           protein 1 [Potentilla discolor]
          Length = 234

 Score =  179 bits (454), Expect = 2e-43
 Identities = 95/124 (76%), Positives = 100/124 (80%), Gaps = 7/124 (5%)
 Frame = -2

Query: 478 PLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKKAHM 299
           PLP+E  GGY R GRTPWEIKE E EYKMRFDMPGM KEDVKVWVEEKMLVVKAEK A  
Sbjct: 113 PLPTES-GGYSR-GRTPWEIKEAETEYKMRFDMPGMTKEDVKVWVEEKMLVVKAEKAAKK 170

Query: 298 NDDD-------DGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKAVYSSN 140
             DD       +GE WSAKSYGRYSSRIALPEN+Q E IKAEVKDGVLYI+IPKA+ SS 
Sbjct: 171 KKDDGTGVEEEEGEEWSAKSYGRYSSRIALPENIQFEKIKAEVKDGVLYISIPKALSSSK 230

Query: 139 ILDI 128
           ILDI
Sbjct: 231 ILDI 234


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