BLASTX nr result
ID: Glycyrrhiza23_contig00023039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00023039 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003594508.1| F-box family protein [Medicago truncatula] g... 52 2e-13 ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ... 52 2e-13 ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|35549... 54 3e-13 ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncat... 57 5e-13 ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|35548... 62 5e-11 >ref|XP_003594508.1| F-box family protein [Medicago truncatula] gi|355483556|gb|AES64759.1| F-box family protein [Medicago truncatula] Length = 597 Score = 51.6 bits (122), Expect(2) = 2e-13 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = +1 Query: 1 PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPL 180 PKF KKHL VST R HL+++ NSSRKF L P+SS ++++A TQL YPL Sbjct: 85 PKFIKKHLHVSTTRL--HLVLAFANSSRKFALSAYPLSSFFTDVTSTA-----TQLDYPL 137 Query: 181 TINKKQHHLF 210 N + +LF Sbjct: 138 --NNRIRNLF 145 Score = 48.5 bits (114), Expect(2) = 2e-13 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +3 Query: 219 LAVCSCDGILCFPIDQRFALLWNPSIR 299 L V SC GILCF +DQRFALLWNPSI+ Sbjct: 147 LIVGSCHGILCFALDQRFALLWNPSIK 173 >ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago truncatula] gi|355504317|gb|AES85520.1| Nuclear transcription factor Y subunit A-7, partial [Medicago truncatula] Length = 455 Score = 51.6 bits (122), Expect(2) = 2e-13 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = +1 Query: 1 PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPL 180 PKF KKHL VST R HL+++ NSSRKF L P+SS ++++A TQL YPL Sbjct: 85 PKFIKKHLHVSTTRL--HLVLAFANSSRKFALSAYPLSSFFTDVTSTA-----TQLDYPL 137 Query: 181 TINKKQHHLF 210 N + +LF Sbjct: 138 --NNRIRNLF 145 Score = 48.5 bits (114), Expect(2) = 2e-13 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +3 Query: 219 LAVCSCDGILCFPIDQRFALLWNPSIR 299 L V SC GILCF +DQRFALLWNPSI+ Sbjct: 147 LIVGSCHGILCFALDQRFALLWNPSIK 173 >ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|355491661|gb|AES72864.1| F-box protein [Medicago truncatula] Length = 348 Score = 53.5 bits (127), Expect(2) = 3e-13 Identities = 34/63 (53%), Positives = 41/63 (65%) Frame = +1 Query: 4 KFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPLT 183 KFAKKHLR+S R LIVSS N S + L WDS ISSV + S S S++ QTQL P + Sbjct: 83 KFAKKHLRMSK---RVALIVSSVNDSGEPLFWDSSISSVFSNASNS-SSVTQTQLICPFS 138 Query: 184 INK 192 + K Sbjct: 139 LTK 141 Score = 46.2 bits (108), Expect(2) = 3e-13 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 204 SFSTTLAVCSCDGILCFPIDQRFALLWNPSI 296 S + L +CSCDGILCF I +R ++LWNPSI Sbjct: 138 SLTKYLEICSCDGILCFTIARRSSVLWNPSI 168 >ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355488267|gb|AES69470.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 417 Score = 56.6 bits (135), Expect(2) = 5e-13 Identities = 32/59 (54%), Positives = 38/59 (64%) Frame = +1 Query: 1 PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYP 177 PKFAKKHLR+S RH HLIV + S + +L+DSPISS S S + QTQL YP Sbjct: 69 PKFAKKHLRLSIKRH--HLIVCPADLSSRVILYDSPISSFF-----SKSGVTQTQLSYP 120 Score = 42.4 bits (98), Expect(2) = 5e-13 Identities = 18/31 (58%), Positives = 20/31 (64%) Frame = +3 Query: 207 FSTTLAVCSCDGILCFPIDQRFALLWNPSIR 299 F + SCDGILC ID A+LWNPSIR Sbjct: 124 FENPTNISSCDGILCLTIDDGSAILWNPSIR 154 >ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|355487382|gb|AES68585.1| F-box protein [Medicago truncatula] Length = 417 Score = 62.0 bits (149), Expect(2) = 5e-11 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = +1 Query: 1 PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYP 177 PKFAKKHL++STARH HL++ STN+ K L+DSPI S+ S S + QTQL YP Sbjct: 70 PKFAKKHLQMSTARH--HLMLRSTNNLGKLFLYDSPIQSIF-----STSRVKQTQLNYP 121 Score = 30.0 bits (66), Expect(2) = 5e-11 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = +3 Query: 231 SCDGILCFPIDQRF--ALLWNPSI 296 SCDGILC + A+LWNPSI Sbjct: 133 SCDGILCISNTNYYSCAVLWNPSI 156