BLASTX nr result

ID: Glycyrrhiza23_contig00023039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023039
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594508.1| F-box family protein [Medicago truncatula] g...    52   2e-13
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    52   2e-13
ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|35549...    54   3e-13
ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncat...    57   5e-13
ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|35548...    62   5e-11

>ref|XP_003594508.1| F-box family protein [Medicago truncatula]
           gi|355483556|gb|AES64759.1| F-box family protein
           [Medicago truncatula]
          Length = 597

 Score = 51.6 bits (122), Expect(2) = 2e-13
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +1

Query: 1   PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPL 180
           PKF KKHL VST R   HL+++  NSSRKF L   P+SS    ++++A     TQL YPL
Sbjct: 85  PKFIKKHLHVSTTRL--HLVLAFANSSRKFALSAYPLSSFFTDVTSTA-----TQLDYPL 137

Query: 181 TINKKQHHLF 210
             N +  +LF
Sbjct: 138 --NNRIRNLF 145



 Score = 48.5 bits (114), Expect(2) = 2e-13
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +3

Query: 219 LAVCSCDGILCFPIDQRFALLWNPSIR 299
           L V SC GILCF +DQRFALLWNPSI+
Sbjct: 147 LIVGSCHGILCFALDQRFALLWNPSIK 173


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 51.6 bits (122), Expect(2) = 2e-13
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +1

Query: 1   PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPL 180
           PKF KKHL VST R   HL+++  NSSRKF L   P+SS    ++++A     TQL YPL
Sbjct: 85  PKFIKKHLHVSTTRL--HLVLAFANSSRKFALSAYPLSSFFTDVTSTA-----TQLDYPL 137

Query: 181 TINKKQHHLF 210
             N +  +LF
Sbjct: 138 --NNRIRNLF 145



 Score = 48.5 bits (114), Expect(2) = 2e-13
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +3

Query: 219 LAVCSCDGILCFPIDQRFALLWNPSIR 299
           L V SC GILCF +DQRFALLWNPSI+
Sbjct: 147 LIVGSCHGILCFALDQRFALLWNPSIK 173


>ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|355491661|gb|AES72864.1|
           F-box protein [Medicago truncatula]
          Length = 348

 Score = 53.5 bits (127), Expect(2) = 3e-13
 Identities = 34/63 (53%), Positives = 41/63 (65%)
 Frame = +1

Query: 4   KFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYPLT 183
           KFAKKHLR+S    R  LIVSS N S + L WDS ISSV +  S S S++ QTQL  P +
Sbjct: 83  KFAKKHLRMSK---RVALIVSSVNDSGEPLFWDSSISSVFSNASNS-SSVTQTQLICPFS 138

Query: 184 INK 192
           + K
Sbjct: 139 LTK 141



 Score = 46.2 bits (108), Expect(2) = 3e-13
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 204 SFSTTLAVCSCDGILCFPIDQRFALLWNPSI 296
           S +  L +CSCDGILCF I +R ++LWNPSI
Sbjct: 138 SLTKYLEICSCDGILCFTIARRSSVLWNPSI 168


>ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488267|gb|AES69470.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 417

 Score = 56.6 bits (135), Expect(2) = 5e-13
 Identities = 32/59 (54%), Positives = 38/59 (64%)
 Frame = +1

Query: 1   PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYP 177
           PKFAKKHLR+S  RH  HLIV   + S + +L+DSPISS       S S + QTQL YP
Sbjct: 69  PKFAKKHLRLSIKRH--HLIVCPADLSSRVILYDSPISSFF-----SKSGVTQTQLSYP 120



 Score = 42.4 bits (98), Expect(2) = 5e-13
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +3

Query: 207 FSTTLAVCSCDGILCFPIDQRFALLWNPSIR 299
           F     + SCDGILC  ID   A+LWNPSIR
Sbjct: 124 FENPTNISSCDGILCLTIDDGSAILWNPSIR 154


>ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|355487382|gb|AES68585.1|
           F-box protein [Medicago truncatula]
          Length = 417

 Score = 62.0 bits (149), Expect(2) = 5e-11
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +1

Query: 1   PKFAKKHLRVSTARHRHHLIVSSTNSSRKFLLWDSPISSVLNALSTSASAIPQTQLKYP 177
           PKFAKKHL++STARH  HL++ STN+  K  L+DSPI S+      S S + QTQL YP
Sbjct: 70  PKFAKKHLQMSTARH--HLMLRSTNNLGKLFLYDSPIQSIF-----STSRVKQTQLNYP 121



 Score = 30.0 bits (66), Expect(2) = 5e-11
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 SCDGILCFPIDQRF--ALLWNPSI 296
           SCDGILC      +  A+LWNPSI
Sbjct: 133 SCDGILCISNTNYYSCAVLWNPSI 156


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