BLASTX nr result

ID: Glycyrrhiza23_contig00023038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023038
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref...    64   1e-08
ref|XP_003598106.1| F-box/kelch-repeat protein [Medicago truncat...    64   1e-08
ref|XP_003598330.1| F-box protein [Medicago truncatula] gi|35548...    62   4e-08
ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|35548...    62   4e-08
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    62   4e-08

>ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref|XP_003599642.1| F-box
           [Medicago truncatula] gi|355488679|gb|AES69882.1| F-box
           [Medicago truncatula] gi|355488690|gb|AES69893.1| F-box
           [Medicago truncatula]
          Length = 350

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/68 (57%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 12  LTTSTRALTS-PSLPGDSXXXXXXXXXXXXXXXVEILQRLPVKSLLLLRCVCKSWNSLIS 188
           + T+   LTS PSLP D                 EIL RLPVKSLL  RCVCKSW SLIS
Sbjct: 7   MITNNVTLTSLPSLPFDLVP--------------EILCRLPVKSLLQFRCVCKSWKSLIS 52

Query: 189 DPKFAKKH 212
           DPKFAKKH
Sbjct: 53  DPKFAKKH 60


>ref|XP_003598106.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487154|gb|AES68357.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 397

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +3

Query: 111 EILQRLPVKSLLLLRCVCKSWNSLISDPKFAKKH 212
           EIL RLPVK LL LRC CKSWNSLISDPKFAKKH
Sbjct: 57  EILSRLPVKLLLQLRCSCKSWNSLISDPKFAKKH 90


>ref|XP_003598330.1| F-box protein [Medicago truncatula] gi|355487378|gb|AES68581.1|
           F-box protein [Medicago truncatula]
          Length = 400

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/70 (51%), Positives = 40/70 (57%)
 Frame = +3

Query: 3   LPILTTSTRALTSPSLPGDSXXXXXXXXXXXXXXXVEILQRLPVKSLLLLRCVCKSWNSL 182
           LP L++S  +L  P LP                   EIL RLPVK LL LRC CKSWNSL
Sbjct: 15  LPTLSSSGHSLYDPPLP-----------TLPFDLVAEILCRLPVKLLLQLRCFCKSWNSL 63

Query: 183 ISDPKFAKKH 212
           I+D KFAKKH
Sbjct: 64  ITDHKFAKKH 73


>ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|355487161|gb|AES68364.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/63 (55%), Positives = 38/63 (60%)
 Frame = +3

Query: 24  TRALTSPSLPGDSXXXXXXXXXXXXXXXVEILQRLPVKSLLLLRCVCKSWNSLISDPKFA 203
           T+ LTSPSL                    EIL RLPVK LL LRC CKSW+SLIS+PKFA
Sbjct: 34  TKTLTSPSLHA----LPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKFA 89

Query: 204 KKH 212
           KKH
Sbjct: 90  KKH 92


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/63 (55%), Positives = 38/63 (60%)
 Frame = +3

Query: 24  TRALTSPSLPGDSXXXXXXXXXXXXXXXVEILQRLPVKSLLLLRCVCKSWNSLISDPKFA 203
           T+ LTSPSL                    EIL RLPVK LL LRC CKSW+SLIS+PKFA
Sbjct: 34  TKTLTSPSLHA----LPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKFA 89

Query: 204 KKH 212
           KKH
Sbjct: 90  KKH 92


Top