BLASTX nr result

ID: Glycyrrhiza23_contig00022989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022989
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   461   e-127
ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   457   e-126
ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   405   e-111
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...   395   e-108
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104

>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  461 bits (1186), Expect = e-127
 Identities = 243/320 (75%), Positives = 259/320 (80%), Gaps = 7/320 (2%)
 Frame = -3

Query: 939  YNRYGGGRHYPSTVGSWDGTTTSINXXXXXXXXXDHLDLPGRQGCGIPCYWSKRK----- 775
            YNRYG    YPST+GSWDGTTTS+N         DHLDLPGRQGCGIPCYWSKR      
Sbjct: 270  YNRYG--HRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRG 327

Query: 774  --GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSG 601
              GSC SPSLSDTLRRKGSSM CGSQ+IYP              SLRSA+GV+PLLTNSG
Sbjct: 328  MCGSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSASASHKRRLSLRSARGVIPLLTNSG 387

Query: 600  DVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEG 421
            DVREGSS+GTGRS  DDELSTNFGELDLEGLSRLDG           QEGLEIVALNGEG
Sbjct: 388  DVREGSSVGTGRS--DDELSTNFGELDLEGLSRLDGRRWSSSCRS--QEGLEIVALNGEG 443

Query: 420  EDDGTPENSRSFSHKYKPLFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST 241
            E DGTPEN+RSFS KY+P+FFGELIGQN+VVQSLI+AVSRGRIAPVYLFQGPRGTGKTST
Sbjct: 444  EYDGTPENNRSFSQKYRPMFFGELIGQNVVVQSLISAVSRGRIAPVYLFQGPRGTGKTST 503

Query: 240  ARIFAAALNCVAASDESKPCGYCGECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSV 61
            ARIFAAALNC A+ +ESKPCGYC EC DFISGKSSDL+EVDGTNK GIDKARYLLKRLS 
Sbjct: 504  ARIFAAALNC-ASPNESKPCGYCRECVDFISGKSSDLLEVDGTNKRGIDKARYLLKRLST 562

Query: 60   RSSSAYSRYTVFVIDECHLL 1
             SSSA  +YT+FVIDECHLL
Sbjct: 563  GSSSASPQYTIFVIDECHLL 582


>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  457 bits (1177), Expect = e-126
 Identities = 242/320 (75%), Positives = 256/320 (80%), Gaps = 7/320 (2%)
 Frame = -3

Query: 939  YNRYGGGRHYPSTVGSWDGTTTSINXXXXXXXXXDHLDLPGRQGCGIPCYWSKRK----- 775
            YNRYG    YPST+GSWDGTTTS+N         DHLDLPGRQGCGIPCYWSKR      
Sbjct: 267  YNRYG--HRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRR 324

Query: 774  --GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSG 601
              GSC SPSLSDTLRRKGSSM CGSQSIYP              SLRSA+GV+PLLTNSG
Sbjct: 325  MCGSCYSPSLSDTLRRKGSSMLCGSQSIYPTHRRSASASHKRRLSLRSARGVIPLLTNSG 384

Query: 600  DVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEG 421
            DVREGSS+GTG  + DDELSTNFGELDLEGLSRLDG           QEGLEIVALNGEG
Sbjct: 385  DVREGSSVGTG--WSDDELSTNFGELDLEGLSRLDGRRWSSSCRS--QEGLEIVALNGEG 440

Query: 420  EDDGTPENSRSFSHKYKPLFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST 241
            E + TPEN+RSFS KY+P+FFGEL GQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST
Sbjct: 441  EYESTPENNRSFSQKYRPMFFGELFGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST 500

Query: 240  ARIFAAALNCVAASDESKPCGYCGECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSV 61
            ARIFAAALNC A+ DESKPCGYC EC DFISGKSSDL+EVDGTNK GIDKARYLLKRLS 
Sbjct: 501  ARIFAAALNC-ASPDESKPCGYCRECVDFISGKSSDLLEVDGTNKRGIDKARYLLKRLSS 559

Query: 60   RSSSAYSRYTVFVIDECHLL 1
             SSSA  +YT+FVIDECHLL
Sbjct: 560  GSSSASPQYTIFVIDECHLL 579


>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223541434|gb|EEF42984.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1270

 Score =  405 bits (1041), Expect = e-111
 Identities = 216/320 (67%), Positives = 243/320 (75%), Gaps = 7/320 (2%)
 Frame = -3

Query: 939  YNRYGGGRHYPSTVGSWDGTTTSINXXXXXXXXXDHLDLPGRQGCGIPCYWSKRK----- 775
            YNRY    H PSTVGSWDGTT S+N          HLDLPGRQGCGIPCYWSKR      
Sbjct: 274  YNRYCN--HNPSTVGSWDGTTASVNDGDDEVDD--HLDLPGRQGCGIPCYWSKRTPRHRG 329

Query: 774  --GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSG 601
              GSCCSPSLSDT++RKG+SM CG QS+Y               S RSAQG+LPLL NS 
Sbjct: 330  VCGSCCSPSLSDTIQRKGTSMLCGRQSMYHRRWHSSSVYNKRRISSRSAQGLLPLLANS- 388

Query: 600  DVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEG 421
            D R GSS+GTG S  DDELSTNFGELDLE LSRLDG           Q+GLEIVALNG+G
Sbjct: 389  DGRGGSSIGTGNS--DDELSTNFGELDLEALSRLDGRRWSSCRS---QDGLEIVALNGDG 443

Query: 420  EDDGTPENSRSFSHKYKPLFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST 241
            E++GTPEN RS S KYKPLFFGE+IGQNIVVQSLINA+SRGRIAPVYLFQGPRGTGKTST
Sbjct: 444  EEEGTPENIRSLSQKYKPLFFGEVIGQNIVVQSLINAISRGRIAPVYLFQGPRGTGKTST 503

Query: 240  ARIFAAALNCVAASDESKPCGYCGECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSV 61
            ARIFA+ALNC+ +++E+KPCGYC +C+DFISGK+ DL EVDGTNK GIDK R+LLK++S 
Sbjct: 504  ARIFASALNCI-STEETKPCGYCRDCSDFISGKARDLWEVDGTNKKGIDKVRHLLKKVSQ 562

Query: 60   RSSSAYSRYTVFVIDECHLL 1
               +  SRY VF+IDECHLL
Sbjct: 563  WPPTGSSRYKVFLIDECHLL 582


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
            gi|449478091|ref|XP_004155220.1| PREDICTED:
            uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score =  395 bits (1015), Expect = e-108
 Identities = 216/320 (67%), Positives = 234/320 (73%), Gaps = 7/320 (2%)
 Frame = -3

Query: 939  YNRYGGGRHYPSTVGSWDGTTTSINXXXXXXXXXDHLDLPGRQGCGIPCYWSKRK----- 775
            YNRY      PSTVGSWDGTTTSIN           LD PGRQGCGIPCYWSKR      
Sbjct: 298  YNRYVNRN--PSTVGSWDGTTTSINDADDEVDD--RLDFPGRQGCGIPCYWSKRTPKHRG 353

Query: 774  --GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSG 601
              GSCCSPSLSDTLRRKGSS+  GSQSIY                  SA+GVLPLLTNS 
Sbjct: 354  ICGSCCSPSLSDTLRRKGSSILFGSQSIYSRRKSINSSKRRFASG--SARGVLPLLTNSA 411

Query: 600  DVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEG 421
            D   GSS+GTGRS  DDELSTNFGELDLE LSRLDG            EGLEIVALNGE 
Sbjct: 412  DGGVGSSIGTGRS--DDELSTNFGELDLEALSRLDGRRWSSSCRS--HEGLEIVALNGEV 467

Query: 420  EDDGTPENSRSFSHKYKPLFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTST 241
            E  GTPE++RSFS KYKP+FF ELIGQNIVVQSLINA+SRGRIAPVYLFQGPRGTGKT+ 
Sbjct: 468  EGGGTPESTRSFSQKYKPMFFNELIGQNIVVQSLINAISRGRIAPVYLFQGPRGTGKTAA 527

Query: 240  ARIFAAALNCVAASDESKPCGYCGECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSV 61
            ARIFAAALNC+ A +E+KPCGYC EC DF++GK  DL+EVDGTNK GIDK RY LK LS 
Sbjct: 528  ARIFAAALNCL-APEENKPCGYCRECTDFMAGKQKDLLEVDGTNKKGIDKIRYQLKLLSS 586

Query: 60   RSSSAYSRYTVFVIDECHLL 1
              SSA+ RY +F++DECHLL
Sbjct: 587  GQSSAFFRYKIFLVDECHLL 606


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
            predicted protein [Populus trichocarpa]
          Length = 1197

 Score =  384 bits (986), Expect = e-104
 Identities = 206/321 (64%), Positives = 230/321 (71%), Gaps = 8/321 (2%)
 Frame = -3

Query: 939  YNRYGGGRHYPSTVGSWDGTTTSINXXXXXXXXXDHLDLPGRQGCGIPCYWSKRK----- 775
            Y++Y   +  PS VGSWD TTTS+N          HLDLPGRQGCGIPCYWSKR      
Sbjct: 294  YDKYR--KRNPSNVGSWDATTTSVNDGDDEDDD--HLDLPGRQGCGIPCYWSKRTPRYRG 349

Query: 774  ---GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNS 604
                SCCSPSLSDTLRRKGSSMFCGSQ +Y                 R+   +LPLLTNS
Sbjct: 350  VCGSSCCSPSLSDTLRRKGSSMFCGSQPLYHRRRRSWSISNKRRIGSRTGHALLPLLTNS 409

Query: 603  GDVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGE 424
            GD   GSS+GTG S  DDELSTN+GELDLE LSRLDG           Q+GLEIVALNG+
Sbjct: 410  GDGIGGSSIGTGLS--DDELSTNYGELDLEALSRLDGRRWSSCRS---QDGLEIVALNGD 464

Query: 423  GEDDGTPENSRSFSHKYKPLFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTS 244
            GE++GTPEN  S S KYKP+FF ELIGQNIVVQSL NA+SRGRIAPVYLFQGPRG GKTS
Sbjct: 465  GEEEGTPENIGSLSQKYKPVFFSELIGQNIVVQSLTNAISRGRIAPVYLFQGPRGIGKTS 524

Query: 243  TARIFAAALNCVAASDESKPCGYCGECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLS 64
             ARIFA+ALNC +A +E KPCGYC EC+D ISGK+ DL EVDGT+K GIDK RYLLK++S
Sbjct: 525  AARIFASALNCTSA-EEIKPCGYCRECSDSISGKTRDLWEVDGTDKKGIDKVRYLLKKIS 583

Query: 63   VRSSSAYSRYTVFVIDECHLL 1
             R     S Y VF+IDECHLL
Sbjct: 584  HRPPLGSSHYKVFLIDECHLL 604


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