BLASTX nr result

ID: Glycyrrhiza23_contig00022968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022968
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606337.1| DNA ligase [Medicago truncatula] gi|35550739...   137   9e-31
ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]        134   1e-29
dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]              133   2e-29
ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]        132   2e-29
ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata] gi...   122   4e-26

>ref|XP_003606337.1| DNA ligase [Medicago truncatula] gi|355507392|gb|AES88534.1| DNA
           ligase [Medicago truncatula]
          Length = 426

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/87 (75%), Positives = 74/87 (85%)
 Frame = -1

Query: 262 PRLKTKPSEFDPGSVVCWEKDQPVPFLFLSLAFNIISGETGRIATTDIACNLLRTVIHAT 83
           P LK KP  FDP SVVCWEK++PVPFLFLSLAF++IS E GRI  T+I CNLLRTVIHAT
Sbjct: 95  PELKKKPENFDPSSVVCWEKNKPVPFLFLSLAFDLISKERGRIVITEIVCNLLRTVIHAT 154

Query: 82  PADLVLVVYLSANRIAPPHQGLELGIG 2
           P DLV VVYLSAN+IAP ++GLELGIG
Sbjct: 155 PDDLVPVVYLSANKIAPAYKGLELGIG 181


>ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 776

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/87 (72%), Positives = 74/87 (85%)
 Frame = -1

Query: 262 PRLKTKPSEFDPGSVVCWEKDQPVPFLFLSLAFNIISGETGRIATTDIACNLLRTVIHAT 83
           P+LK KPS+FDP S+  WEK QPVPFLFL LAF++IS E+GRI  TDI CNLLRTV+++T
Sbjct: 137 PQLKKKPSDFDPASISAWEKGQPVPFLFLCLAFDMISQESGRIVITDIVCNLLRTVMYST 196

Query: 82  PADLVLVVYLSANRIAPPHQGLELGIG 2
           P DLV VVYLSANRIAP H+G+ELGIG
Sbjct: 197 PEDLVKVVYLSANRIAPAHEGMELGIG 223


>dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
          Length = 682

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/87 (73%), Positives = 73/87 (83%)
 Frame = -1

Query: 262 PRLKTKPSEFDPGSVVCWEKDQPVPFLFLSLAFNIISGETGRIATTDIACNLLRTVIHAT 83
           P+LK KP  FDP SVV WEK++PVPFLFL LAF++I+ E+GRI  TDI CNLLRTVI+ T
Sbjct: 44  PQLKKKPPSFDPSSVVSWEKEKPVPFLFLCLAFDMINEESGRIVKTDIVCNLLRTVIYTT 103

Query: 82  PADLVLVVYLSANRIAPPHQGLELGIG 2
           P DLV VVYLSANRIAP H+GLELGIG
Sbjct: 104 PEDLVPVVYLSANRIAPAHEGLELGIG 130


>ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 701

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = -1

Query: 262 PRLKTKPSEFDPGSVVCWEKDQPVPFLFLSLAFNIISGETGRIATTDIACNLLRTVIHAT 83
           P+LK KPS+FDP S+  WEK QPVPFLFL L F+IIS E+ RI  TDI CNLLRTV+H T
Sbjct: 86  PQLKKKPSDFDPASITAWEKGQPVPFLFLCLVFDIISQESKRIVITDIVCNLLRTVMHCT 145

Query: 82  PADLVLVVYLSANRIAPPHQGLELGIG 2
           P DLV VVYLSANRIAP H+G+ELGIG
Sbjct: 146 PEDLVKVVYLSANRIAPAHEGVELGIG 172


>ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 793

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/85 (67%), Positives = 68/85 (80%)
 Frame = -1

Query: 256 LKTKPSEFDPGSVVCWEKDQPVPFLFLSLAFNIISGETGRIATTDIACNLLRTVIHATPA 77
           LK KP++FDP  V CWEK + VPFLFL+LAF++IS E+GRI  TDI CN+LRTVI  TP 
Sbjct: 157 LKKKPNDFDPEKVSCWEKGERVPFLFLALAFDLISNESGRIVITDILCNMLRTVIATTPE 216

Query: 76  DLVLVVYLSANRIAPPHQGLELGIG 2
           DLV  VYL+AN IAP H+G+ELGIG
Sbjct: 217 DLVATVYLAANEIAPAHEGVELGIG 241


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