BLASTX nr result

ID: Glycyrrhiza23_contig00022945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022945
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   196   2e-48
ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...   189   2e-46
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   154   5e-36
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   146   2e-33
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              146   2e-33

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/118 (79%), Positives = 101/118 (85%)
 Frame = +3

Query: 3   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 182
           D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC
Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435

Query: 183 CLTEEDGFRSGCDAMAVDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFW 356
             T++ G  SGCDAM VDGCRI TASY ED GVLRFRDFN+AT PVTKLENEP SKFW
Sbjct: 436 SSTDDAG--SGCDAMTVDGCRITTASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFW 491


>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/119 (78%), Positives = 100/119 (84%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 182
           D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC
Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385

Query: 183 CLTEEDGFRSGCDAMAVDGCRIATASYCEDYGVLRFRDFN-NATRPVTKLENEPPSKFW 356
            LT  DG  SGCDAMAVDGCRI T SY ED GVL FRD+N +AT PVTKLENEP SKFW
Sbjct: 386 SLT--DGAGSGCDAMAVDGCRITTTSYSEDSGVLCFRDYNHDATNPVTKLENEPSSKFW 442


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/120 (63%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 182
           DIR NQE LKPEP+AELDGH GPVT L+MD YKIVTGGP+D+Y+NVWE  TG QTNS +C
Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426

Query: 183 CLTEEDGFRS--GCDAMAVDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFW 356
           C ++     S  GC AMAV+G RI TASY E++G++ FRDF NAT  V+K E+   SKFW
Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRIVTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFW 486


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/119 (59%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 182
           DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C
Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422

Query: 183 CLTEEDGFRSGCDAMAVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFW 356
              E      GC AMA DGCRI TAS   + G++ FRDF +AT PV+   E++P SKFW
Sbjct: 423 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 481


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/119 (59%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 182
           DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C
Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419

Query: 183 CLTEEDGFRSGCDAMAVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFW 356
              E      GC AMA DGCRI TAS   + G++ FRDF +AT PV+   E++P SKFW
Sbjct: 420 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 478


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