BLASTX nr result

ID: Glycyrrhiza23_contig00022936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022936
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycin...   245   3e-63
ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]         244   5e-63
ref|XP_003636176.1| Cyclin-U4-1 [Medicago truncatula] gi|2170719...   243   9e-63
ref|XP_003552477.1| PREDICTED: cyclin-U4-1-like [Glycine max]         241   6e-62
gb|AFK41945.1| unknown [Lotus japonicus]                              240   8e-62

>ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycine max]
           gi|255626323|gb|ACU13506.1| unknown [Glycine max]
          Length = 209

 Score =  245 bits (625), Expect = 3e-63
 Identities = 120/146 (82%), Positives = 128/146 (87%)
 Frame = -3

Query: 438 IQSYLERIFKYANCSPSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 259
           IQ YLERIFKYANCSPSCF+VAYVYLDRFTQ QPSLPINSFNVHRLLITSVMVAAKFMDD
Sbjct: 55  IQCYLERIFKYANCSPSCFVVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDD 114

Query: 258 MYYNNAYYAKVGGITKTEMNXXXXXXXXXXXXXLNVTPGTFQAYCVHLQREMLQMQPLDF 79
           M+YNNA+YAKVGGITK EMN             LNVTPGTFQAYCVHLQREML +QPL+F
Sbjct: 115 MFYNNAHYAKVGGITKVEMNFLELDFLFGLGFHLNVTPGTFQAYCVHLQREMLLIQPLNF 174

Query: 78  ADSTLSLGKSLKAHLCFNEDESSHQK 1
           +DSTL+LG+SLKAHLCFNEDE SHQK
Sbjct: 175 SDSTLNLGQSLKAHLCFNEDECSHQK 200


>ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 202

 Score =  244 bits (623), Expect = 5e-63
 Identities = 123/147 (83%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
 Frame = -3

Query: 438 IQSYLERIFKYANCSPSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 259
           I SYLERIFKYANCSPSCF+VAYVYLDRFTQ QPSLPIN+FNVHRLLITSVMVAAKFMDD
Sbjct: 50  IHSYLERIFKYANCSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDD 109

Query: 258 MYYNNAYYAKVGGITKTEMNXXXXXXXXXXXXXLNVTPGTFQAYCVHLQREMLQM-QPLD 82
           MYYNNAYYAKVGGITK EMN             LNVTPGTFQAYCV+LQREML + QPL+
Sbjct: 110 MYYNNAYYAKVGGITKIEMNFLELDFLFGLGFHLNVTPGTFQAYCVNLQREMLLIQQPLN 169

Query: 81  FADSTLSLGKSLKAHLCFNEDESSHQK 1
           FADSTL+LGKSLKAHLCFNEDESSHQK
Sbjct: 170 FADSTLNLGKSLKAHLCFNEDESSHQK 196


>ref|XP_003636176.1| Cyclin-U4-1 [Medicago truncatula] gi|217071908|gb|ACJ84314.1|
           unknown [Medicago truncatula]
           gi|355502111|gb|AES83314.1| Cyclin-U4-1 [Medicago
           truncatula] gi|388522959|gb|AFK49541.1| unknown
           [Medicago truncatula]
          Length = 200

 Score =  243 bits (621), Expect = 9e-63
 Identities = 124/145 (85%), Positives = 125/145 (86%)
 Frame = -3

Query: 438 IQSYLERIFKYANCSPSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 259
           IQSYLERIFKYANCS SCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD
Sbjct: 49  IQSYLERIFKYANCSSSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 108

Query: 258 MYYNNAYYAKVGGITKTEMNXXXXXXXXXXXXXLNVTPGTFQAYCVHLQREMLQMQPLDF 79
           + YNNAYYAKVGGITKTEMN             LNVTP TFQAYCVHLQREMLQMQPL F
Sbjct: 109 VCYNNAYYAKVGGITKTEMNFLELDFLFGLGFNLNVTPVTFQAYCVHLQREMLQMQPLVF 168

Query: 78  ADSTLSLGKSLKAHLCFNEDESSHQ 4
            DSTLSL KSLKAHLC NEDESSHQ
Sbjct: 169 EDSTLSLAKSLKAHLCLNEDESSHQ 193


>ref|XP_003552477.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 205

 Score =  241 bits (614), Expect = 6e-62
 Identities = 122/147 (82%), Positives = 126/147 (85%), Gaps = 1/147 (0%)
 Frame = -3

Query: 438 IQSYLERIFKYANCSPSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 259
           IQSYLERIFKYANCSPSCFIVAYVYLDRFTQ QPSLPIN FNVHRLLITSVMVAAKFMDD
Sbjct: 53  IQSYLERIFKYANCSPSCFIVAYVYLDRFTQRQPSLPINFFNVHRLLITSVMVAAKFMDD 112

Query: 258 MYYNNAYYAKVGGITKTEMNXXXXXXXXXXXXXLNVTPGTFQAYCVHLQREMLQMQPLDF 79
           +YYNNAYYAKVGGIT  EMN             LNVTPGTFQAYC HLQ EML MQPL+F
Sbjct: 113 LYYNNAYYAKVGGITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEMLLMQPLNF 172

Query: 78  ADSTLSLGKSLKAHLCFNEDE-SSHQK 1
           ADS+LSLGKSLKAHLC+NEDE SSHQK
Sbjct: 173 ADSSLSLGKSLKAHLCYNEDESSSHQK 199


>gb|AFK41945.1| unknown [Lotus japonicus]
          Length = 207

 Score =  240 bits (613), Expect = 8e-62
 Identities = 119/145 (82%), Positives = 124/145 (85%)
 Frame = -3

Query: 438 IQSYLERIFKYANCSPSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDD 259
           IQSYLERIFKYANCSPSCFIVAYVYLDRFTQ QPSLPINSFNVHRLLITSVMVAAKFMDD
Sbjct: 54  IQSYLERIFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDD 113

Query: 258 MYYNNAYYAKVGGITKTEMNXXXXXXXXXXXXXLNVTPGTFQAYCVHLQREMLQMQPLDF 79
           MYYNNAYYA+VGGIT  EMN             LNVTPGTFQ YC HLQREM+ +QPL F
Sbjct: 114 MYYNNAYYARVGGITTIEMNFLELDFLFGLGFNLNVTPGTFQGYCSHLQREMMLVQPLIF 173

Query: 78  ADSTLSLGKSLKAHLCFNEDESSHQ 4
            DS+LSLGKS+KAHLCFNEDESSHQ
Sbjct: 174 TDSSLSLGKSVKAHLCFNEDESSHQ 198


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