BLASTX nr result

ID: Glycyrrhiza23_contig00022932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022932
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   155   3e-36
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   154   9e-36
ref|XP_002312645.1| multidrug resistance protein ABC transporter...    99   5e-19
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    92   3e-17
ref|XP_002315634.1| multidrug resistance protein ABC transporter...    87   2e-15

>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  155 bits (392), Expect = 3e-36
 Identities = 91/163 (55%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
 Frame = -3

Query: 484 LILWWVFACIVDMFSVSLKLVKINLESLNLWFFLSEENNIVDAVSXXXXXXLCFNALPNV 305
           LILWWVFAC +D   +SLKLVK   ES++LWFFLSE+N +VD+VS      LCFN    V
Sbjct: 116 LILWWVFACSIDAILLSLKLVK-GFESIDLWFFLSEDN-VVDSVSLPLLVLLCFN----V 169

Query: 304 CAREQS--EMEQRLLQKXXXXXXXXXXXXEAFTKASRWSKLTFRWLNPIFSRGRIQKLEH 131
           CARE S  E EQ+LL +            EAFT AS WSKL FRWLNPIF  GRI+KLE 
Sbjct: 170 CARENSDVEQEQQLLLEKEEESSMEEEDEEAFTNASMWSKLAFRWLNPIFKAGRIKKLEL 229

Query: 130 AHIPSVPRXXXXXXXXXXXXXXLRKQKLEGGSLVKAITHSIWK 2
            HIP VP               LRKQKLEGGSL KAI +S+WK
Sbjct: 230 GHIPPVPPSETAENASSVLEESLRKQKLEGGSLTKAIAYSLWK 272


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  154 bits (388), Expect = 9e-36
 Identities = 91/163 (55%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
 Frame = -3

Query: 484 LILWWVFACIVDMFSVSLKLVKINLESLNLWFFLSEENNIVDAVSXXXXXXLCFNALPNV 305
           LILWW FACI+D   +S KLVK   ES+NLWFFLS++N +VD+VS      LCFN    V
Sbjct: 119 LILWWFFACIIDALLLSSKLVK-KFESINLWFFLSKDN-VVDSVSLPLLVLLCFN----V 172

Query: 304 CAREQSEMEQR--LLQKXXXXXXXXXXXXEAFTKASRWSKLTFRWLNPIFSRGRIQKLEH 131
           CARE S++EQ   LLQK             AFT AS WSKL FRWLNPIF  GRIQKLE 
Sbjct: 173 CARENSDLEQEQMLLQKEEESSMEEEDEQ-AFTNASMWSKLAFRWLNPIFKTGRIQKLEL 231

Query: 130 AHIPSVPRXXXXXXXXXXXXXXLRKQKLEGGSLVKAITHSIWK 2
            HIP VP               LRKQKL+GGSL KAI +SIWK
Sbjct: 232 GHIPPVPPSETAENASSVLEESLRKQKLKGGSLTKAIAYSIWK 274


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
 Frame = -3

Query: 484 LILWWVFACIVDMFSVSLKLVKINLESLNLWFFLSEENNIVDAVSXXXXXXLCFNALPNV 305
           ++LWWVF CI D  SVS+ L+     S+ L +   E N I D  S      LCFNA+   
Sbjct: 4   IVLWWVFYCIFDSLSVSIHLIT-RFSSIELPYPWPEAN-IADFASLPLLVLLCFNAVTFS 61

Query: 304 CA-REQSEMEQRLLQKXXXXXXXXXXXXEAFTKASRWSKLTFRWLNPIFSRGRIQKLEHA 128
           C+ +   ++E  LLQ+              +  A  WSKLTF+WLNP+FS GRI+KLE +
Sbjct: 62  CSTKTHDDLEIPLLQEKRESLFKDST---CYRSAGIWSKLTFKWLNPLFSSGRIEKLELS 118

Query: 127 HIPSVPRXXXXXXXXXXXXXXLRKQKLEGGSLVKAITHSIWK 2
           H+P VP                 K K E  +L KAI +++WK
Sbjct: 119 HVPPVPASETAKYASSLLEDSFGKNKKETLNLPKAIAYAVWK 160


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
 Frame = -3

Query: 484 LILWWVFACIVDMFSVSLKLVKINLESLNLWFFLSEENNIVDAVSXXXXXXLCFNALPNV 305
           LILWWVF+CI+   SVS+  +  +  S+ L   L + N IV+ +S      LC  AL   
Sbjct: 126 LILWWVFSCIMYSASVSIYFIT-HFSSIQLPNPLPKPN-IVEFISFPFSILLCCLALRFS 183

Query: 304 CA-REQSEMEQRLLQKXXXXXXXXXXXXEAFTKASRWSKLTFRWLNPIFSRGRIQKLEHA 128
           C+ R  + ++Q LLQ+             +FT A  WS++TF+WLNP+F RGRIQKLE +
Sbjct: 184 CSTRIGTGLKQPLLQEERKRVLKDSS---SFTTAGIWSQITFQWLNPLFRRGRIQKLELS 240

Query: 127 HIPSVPRXXXXXXXXXXXXXXLRKQKLEGGSLVKAITHSIWK 2
           +IP VP+              L K+K E  +L KAI +++WK
Sbjct: 241 NIPLVPQSETAKCSSSLLEESLGKRKNESSNLPKAIAYAVWK 282


>ref|XP_002315634.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864674|gb|EEF01805.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 342

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
 Frame = -3

Query: 484 LILWWVFACIVDMFSVSLKLVKINLESLNLWFFLSEENNIVDAVSXXXXXXLCFNALPNV 305
           +ILWWV   I    SVS+  +     S+ L +   E N I D  S      L  NAL   
Sbjct: 123 VILWWVVYSIFCSLSVSIHFIT-RFSSIELPYSWPEAN-IADFPSLPLSILLSLNALTFR 180

Query: 304 C--AREQSEMEQRLLQKXXXXXXXXXXXXEAFTKASRWSKLTFRWLNPIFSRGRIQKLEH 131
           C   +  +++E  LLQ+              +  A  WSKLTFRW+NP+FSRGR++KLE 
Sbjct: 181 CRSTKTHNDLETPLLQEEHESLFKDSA---CYRNAGIWSKLTFRWINPLFSRGRMEKLEL 237

Query: 130 AHIPSVPRXXXXXXXXXXXXXXLRKQKLEGGSLVKAITHSIWK 2
           +H+PSVP                 K K E  +L KAI +++WK
Sbjct: 238 SHVPSVPASETAGYASSLLEDSFGKNKNETSNLPKAIAYAVWK 280


Top