BLASTX nr result

ID: Glycyrrhiza23_contig00022896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022896
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814...   128   6e-28
ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag...   125   3e-27
ref|XP_002266532.2| PREDICTED: uncharacterized protein LOC100255...    98   7e-19
emb|CBI31917.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212...    89   3e-16

>ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max]
          Length = 446

 Score =  128 bits (321), Expect = 6e-28
 Identities = 76/135 (56%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
 Frame = -3

Query: 380 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXPTAXXXXXXXXXX 201
           MGTRTNFYKNPSISY K  S+SSVLQNL AYNIA GNV          TA          
Sbjct: 1   MGTRTNFYKNPSISYKKRLSISSVLQNLHAYNIAAGNVPPADPPQATSTANVPPGNPPHL 60

Query: 200 XXXXRXXXXXXXXXXD--------GPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGN 45
               R          +         PSSMSH DYIQ RRKEV SS+NHDRVELTE+VLGN
Sbjct: 61  TPSARLKRSRNPEPPEFLREYRDDAPSSMSHHDYIQNRRKEVVSSRNHDRVELTEEVLGN 120

Query: 44  PNSAVPLVDY-ASDE 3
            NS +PLVDY ASDE
Sbjct: 121 SNSTLPLVDYDASDE 135


>ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 452

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/126 (57%), Positives = 78/126 (61%)
 Frame = -3

Query: 380 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXPTAXXXXXXXXXX 201
           M  RTNFYKNPSISYN++ SLSSVLQNL AYNIATGN+         P            
Sbjct: 1   MSNRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNITSDDQPPPAPAPTASLKRRRHP 60

Query: 200 XXXXRXXXXXXXXXXDGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 21
                          D PSSMSH DYI KRRKEV S++N DRVELTEDVLG  NSA+ LV
Sbjct: 61  RPPQSRHNHHKNDVDDDPSSMSHTDYILKRRKEVDSAKNCDRVELTEDVLGKSNSALSLV 120

Query: 20  DYASDE 3
           DYASDE
Sbjct: 121 DYASDE 126


>ref|XP_002266532.2| PREDICTED: uncharacterized protein LOC100255681 [Vitis vinifera]
          Length = 263

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 62/126 (49%), Positives = 74/126 (58%)
 Frame = -3

Query: 380 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXPTAXXXXXXXXXX 201
           MGTRTNFYKNPS SYN+ FSLSSVLQNL+AYNIATG+          P            
Sbjct: 1   MGTRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSA--SPTDESPPANEKKVNRKRRP 58

Query: 200 XXXXRXXXXXXXXXXDGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 21
                          DGP  MSH+D+I+KRRKEV+S Q +   ELT D+LG  NS + LV
Sbjct: 59  DRRSPPCQNPELKETDGP--MSHQDFIKKRRKEVSSGQVYQ--ELTPDILGTSNSGLHLV 114

Query: 20  DYASDE 3
           +Y SD+
Sbjct: 115 EYESDK 120


>emb|CBI31917.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 62/126 (49%), Positives = 74/126 (58%)
 Frame = -3

Query: 380 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXPTAXXXXXXXXXX 201
           MGTRTNFYKNPS SYN+ FSLSSVLQNL+AYNIATG+          P            
Sbjct: 1   MGTRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSA--SPTDESPPANEKKVNRKRRP 58

Query: 200 XXXXRXXXXXXXXXXDGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 21
                          DGP  MSH+D+I+KRRKEV+S Q +   ELT D+LG  NS + LV
Sbjct: 59  DRRSPPCQNPELKETDGP--MSHQDFIKKRRKEVSSGQVYQ--ELTPDILGTSNSGLHLV 114

Query: 20  DYASDE 3
           +Y SD+
Sbjct: 115 EYESDK 120


>ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus]
           gi|449513293|ref|XP_004164287.1| PREDICTED:
           uncharacterized protein LOC101227135 [Cucumis sativus]
          Length = 443

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 60/129 (46%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
 Frame = -3

Query: 380 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGN---VXXXXXXXXXPTAXXXXXXX 210
           MG+RTNFYKNPSISY K   LSS LQNL+AYNIATGN             P         
Sbjct: 1   MGSRTNFYKNPSISYKKDLHLSSALQNLRAYNIATGNAPPTDVQVQSPPVPVVKKNENRK 60

Query: 209 XXXXXXXRXXXXXXXXXXDGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAV 30
                             DGP  MSH+DYI++RRKE   SQ ++   LTEDVL   +S +
Sbjct: 61  RQREPELCGTQMYDVGNSDGP--MSHQDYIERRRKEANKSQPYE--TLTEDVLVASSSGL 116

Query: 29  PLVDYASDE 3
            LVDY SDE
Sbjct: 117 NLVDYESDE 125


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