BLASTX nr result

ID: Glycyrrhiza23_contig00022892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022892
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...   148   4e-34
ref|XP_003517811.1| PREDICTED: uncharacterized membrane protein ...   142   3e-32
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   141   5e-32
ref|XP_003545724.1| PREDICTED: uncharacterized protein LOC100787...   140   8e-32
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   136   2e-30

>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
            Histone deacetylase [Medicago truncatula]
          Length = 1775

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/113 (62%), Positives = 92/113 (81%)
 Frame = +2

Query: 8    VARSSTESEYRSLANTAAEVLWIQSLLQELKIPFETPILYCDNLSTVALSHNPVLHAKSK 187
            +ARSS E+EYRSLA  +AE++WIQSLL EL+I  + P +YCDNLS V+L+HNPVLH+++K
Sbjct: 1655 LARSSAEAEYRSLAQASAEIIWIQSLLNELQIKSKIPHVYCDNLSAVSLAHNPVLHSRTK 1714

Query: 188  HMELDIFFLREKVLSKTLIVQHLPALDQVADLLTKPLAANRFLTLKQQLRVVD 346
            HMELDIFF+REKV+ K L V H+PA DQ  D+LTKPL+  RFL ++ +LRV D
Sbjct: 1715 HMELDIFFVREKVIRKELNVSHVPAQDQWVDVLTKPLSTARFLYVRDKLRVCD 1767


>ref|XP_003517811.1| PREDICTED: uncharacterized membrane protein C24H6.13-like [Glycine
           max]
          Length = 604

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/116 (56%), Positives = 94/116 (81%)
 Frame = +2

Query: 5   LVARSSTESEYRSLANTAAEVLWIQSLLQELKIPFETPILYCDNLSTVALSHNPVLHAKS 184
           +VARSST++EYRSLA  + EV WIQ+LL EL++    P+++CDN+ TVAL+H+PVLH+++
Sbjct: 76  VVARSSTKAEYRSLAPPSVEVAWIQTLLFELQVRHTAPVVFCDNMITVALAHHPVLHSRT 135

Query: 185 KHMELDIFFLREKVLSKTLIVQHLPALDQVADLLTKPLAANRFLTLKQQLRVVDKS 352
           KHMEL++FF+REKV+ K+L V H+PA+DQ  D+LTK L+ + F   K +LRVVDK+
Sbjct: 136 KHMELELFFVREKVMEKSLQVIHVPAIDQYVDILTKSLSPSNFTIFKDKLRVVDKT 191


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/116 (60%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   LVARSSTESEYRSLANTAAEVLWIQSLLQELKIP-FETPILYCDNLSTVALSHNPVLHAK 181
           +V+RSSTESEYR LAN AAE+ WIQSLL+EL IP F+ P+LYCDNLST  L+ NP+LH++
Sbjct: 205 VVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAANPILHSR 264

Query: 182 SKHMELDIFFLREKVLSKTLIVQHLPALDQVADLLTKPLAANRFLTLKQQLRVVDK 349
           +KH+E+D  F+RE+VL KTL V+ LP+ DQVAD+LTK L+   FL L+ +L V+ +
Sbjct: 265 AKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHFLHLRSKLTVLSR 320


>ref|XP_003545724.1| PREDICTED: uncharacterized protein LOC100787646 [Glycine max]
          Length = 547

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/114 (58%), Positives = 89/114 (78%)
 Frame = +2

Query: 5   LVARSSTESEYRSLANTAAEVLWIQSLLQELKIPFETPILYCDNLSTVALSHNPVLHAKS 184
           +V+RSSTE+EYRSLA   A++LWIQ+LLQEL +P  TPI+ CDN S V L+HNPVLHA++
Sbjct: 46  VVSRSSTETEYRSLAAATADILWIQTLLQELAVPHTTPIMLCDNSSAVQLAHNPVLHART 105

Query: 185 KHMELDIFFLREKVLSKTLIVQHLPALDQVADLLTKPLAANRFLTLKQQLRVVD 346
           K M LD+ F+R+KVL+K L+VQH+P  D+ ADLLTK L++ RF  L  +L V +
Sbjct: 106 KQMVLDVSFVRKKVLTKQLVVQHIPGTDRWADLLTKSLSSTRFTYLSSKLNVAE 159


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/116 (58%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5    LVARSSTESEYRSLANTAAEVLWIQSLLQELKIP-FETPILYCDNLSTVALSHNPVLHAK 181
            +V+RSSTESEYR LAN AA++ WIQSLL+EL +P F+ P+LY DNLST  L+ NPVLH++
Sbjct: 999  VVSRSSTESEYRGLANAAAKLTWIQSLLKELFVPLFQPPVLYYDNLSTTYLATNPVLHSR 1058

Query: 182  SKHMELDIFFLREKVLSKTLIVQHLPALDQVADLLTKPLAANRFLTLKQQLRVVDK 349
            +KH+E+D  F+RE+VL KTL V+ LP+ DQV D+LTK L+  RFL L+ +L V+ +
Sbjct: 1059 AKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKALSTQRFLHLRSKLTVLSR 1114


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