BLASTX nr result

ID: Glycyrrhiza23_contig00022883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022883
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38875.1| unknown [Medicago truncatula]                          214   3e-53
ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814...   203   6e-50
ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|2...   183   5e-44
tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]                   182   1e-43
ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [S...   182   1e-43

>gb|AFK38875.1| unknown [Medicago truncatula]
          Length = 277

 Score =  214 bits (545), Expect = 3e-53
 Identities = 115/188 (61%), Positives = 128/188 (68%)
 Frame = -1

Query: 628 ETLAPSKSTVYVSNLDYTLTNSDLHTLFSTFGKIARVTVLKDRVTRLSRGVAFVQFVSRQ 449
           ETLAPSKST+YVSNLDY+LTNSDLHTLFSTFG+IARVTVLKDR TRLSRGVAF+QFVSR 
Sbjct: 61  ETLAPSKSTIYVSNLDYSLTNSDLHTLFSTFGRIARVTVLKDRHTRLSRGVAFIQFVSRH 120

Query: 448 DAQRAASEMHRKVLNGRTLTASIAADNGRAPEFIRKRVYNTDTARCFECGAQGHLSYDCX 269
           DAQ A +EM++K+LNGRTL+ASIA+DNGRAPEFI+KRVYNT+T  CFECG  GHLSY+C 
Sbjct: 121 DAQIAVTEMNKKILNGRTLSASIASDNGRAPEFIKKRVYNTETGLCFECGGSGHLSYEC- 179

Query: 268 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNWASAVDDG 89
                                                             DNWAS VDDG
Sbjct: 180 ----PKNQLGAKARPQPKKPRRGFGGSGWSKEGDEEEEENGRIGAERFEEDNWASVVDDG 235

Query: 88  ADERLLGR 65
           ADERLLGR
Sbjct: 236 ADERLLGR 243


>ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
          Length = 273

 Score =  203 bits (516), Expect = 6e-50
 Identities = 113/185 (61%), Positives = 121/185 (65%)
 Frame = -1

Query: 625 TLAPSKSTVYVSNLDYTLTNSDLHTLFSTFGKIARVTVLKDRVTRLSRGVAFVQFVSRQD 446
           +LAPSKST+YVSN+DY+LTNSDLHTLFSTFG++ARVTVLKDR TRLSRGVAFVQFVSR D
Sbjct: 57  SLAPSKSTLYVSNIDYSLTNSDLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHD 116

Query: 445 AQRAASEMHRKVLNGRTLTASIAADNGRAPEFIRKRVYNTDTARCFECGAQGHLSYDCXX 266
           A  AA++M  KVLNGRTL ASIAADNGRAPEFIRKRVY  DT RCFECG QGHLSYDC  
Sbjct: 117 AHDAAAQMDGKVLNGRTLAASIAADNGRAPEFIRKRVYR-DTDRCFECGEQGHLSYDCPR 175

Query: 265 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNWASAVDDGA 86
                                                            DNWAS VDDGA
Sbjct: 176 NQLGPRQRPEPKRPRRGPHPHPHRHRHNDNDDAGGDDDDYDGGAERFEDDNWASVVDDGA 235

Query: 85  DERLL 71
            ERLL
Sbjct: 236 GERLL 240


>ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|222864365|gb|EEF01496.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  183 bits (465), Expect = 5e-44
 Identities = 89/117 (76%), Positives = 103/117 (88%)
 Frame = -1

Query: 622 LAPSKSTVYVSNLDYTLTNSDLHTLFSTFGKIARVTVLKDRVTRLSRGVAFVQFVSRQDA 443
           LAPSKST+YVSNLD++LTNSDLHTLFSTFGK+ARVTVLKDR TR SRGVAF+QFVSR DA
Sbjct: 4   LAPSKSTLYVSNLDFSLTNSDLHTLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDA 63

Query: 442 QRAASEMHRKVLNGRTLTASIAADNGRAPEFIRKRVYNTDTARCFECGAQGHLSYDC 272
             A  +M +K+LNGRTL+ASIAADNGRA EFI+KRVY  D ++C+ECG  GHLSY+C
Sbjct: 64  VTAVEQMDKKILNGRTLSASIAADNGRAAEFIKKRVYK-DKSKCYECGEDGHLSYEC 119


>tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
          Length = 261

 Score =  182 bits (462), Expect = 1e-43
 Identities = 91/117 (77%), Positives = 103/117 (88%)
 Frame = -1

Query: 622 LAPSKSTVYVSNLDYTLTNSDLHTLFSTFGKIARVTVLKDRVTRLSRGVAFVQFVSRQDA 443
           LAPSKSTVYVSNLD+ LTNSDLH LFS FG++ARVTVLKDR +R SRGVAFV FVSR+DA
Sbjct: 47  LAPSKSTVYVSNLDFALTNSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDA 106

Query: 442 QRAASEMHRKVLNGRTLTASIAADNGRAPEFIRKRVYNTDTARCFECGAQGHLSYDC 272
             AA+EMH KVLNGRTL+ASIAADNGRA EFIR+RVY  D +RC+ECG +GHLSY+C
Sbjct: 107 AAAAAEMHGKVLNGRTLSASIAADNGRAAEFIRRRVYR-DKSRCYECGEEGHLSYEC 162


>ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
           gi|241926163|gb|EER99307.1| hypothetical protein
           SORBIDRAFT_02g031980 [Sorghum bicolor]
          Length = 270

 Score =  182 bits (462), Expect = 1e-43
 Identities = 91/117 (77%), Positives = 103/117 (88%)
 Frame = -1

Query: 622 LAPSKSTVYVSNLDYTLTNSDLHTLFSTFGKIARVTVLKDRVTRLSRGVAFVQFVSRQDA 443
           LAPSKSTVYVSNLD+ LTNSDLH LFS FG++ARVTVLKDR +R SRGVAFV FVSR+DA
Sbjct: 53  LAPSKSTVYVSNLDFALTNSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDA 112

Query: 442 QRAASEMHRKVLNGRTLTASIAADNGRAPEFIRKRVYNTDTARCFECGAQGHLSYDC 272
             AA+EMH KVLNGRTL+ASIAADNGRA EFIR+RVY  D +RC+ECG +GHLSY+C
Sbjct: 113 AAAAAEMHGKVLNGRTLSASIAADNGRAAEFIRRRVYR-DKSRCYECGEEGHLSYEC 168


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