BLASTX nr result
ID: Glycyrrhiza23_contig00022875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00022875 (678 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539117.1| PREDICTED: transcription regulatory protein ... 188 7e-46 gb|AFK39819.1| unknown [Lotus japonicus] 163 3e-38 ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica... 162 6e-38 ref|XP_003535660.1| PREDICTED: transcription regulatory protein ... 147 2e-33 ref|XP_003592449.1| Chromatin remodeling complex subunit [Medica... 143 3e-32 >ref|XP_003539117.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max] Length = 1063 Score = 188 bits (478), Expect = 7e-46 Identities = 100/159 (62%), Positives = 109/159 (68%) Frame = +3 Query: 3 RKRKEVVYADTLSDLQWTRAVENGQDISKLSAKGKRRDRLPVDSHAQASEDIGAXXXXXX 182 RKR EVVYADTLSDLQW +AVENGQDISKLS KGKRRD LPVD+HAQAS+D+G Sbjct: 932 RKRNEVVYADTLSDLQWMKAVENGQDISKLSVKGKRRDHLPVDNHAQASDDMGTEERLFR 991 Query: 183 XXXXXXXXXDTFNVTPASKRLKHDEINSQKREKEDVRFSGSNEHMFSWNTHRKKRSSYIG 362 DTF+VTPASKRLK +EINSQK E EDV G NEH+FSWNT RKKRS Y+G Sbjct: 992 SE-------DTFDVTPASKRLKPEEINSQKHENEDVSVGGLNEHIFSWNTRRKKRSGYLG 1044 Query: 363 QGSLSDNRGQNSNGXXXXXXXXXXXXXXXXXXNGRANWN 479 QGS SD+RGQNS NGRANWN Sbjct: 1045 QGSFSDSRGQNS--------------------NGRANWN 1063 >gb|AFK39819.1| unknown [Lotus japonicus] Length = 220 Score = 163 bits (412), Expect = 3e-38 Identities = 87/135 (64%), Positives = 98/135 (72%), Gaps = 1/135 (0%) Frame = +3 Query: 3 RKRKEVVYADTLSDLQWTRAVENGQDISKLSAKGKRRDRLPVDSHAQASEDIGAXXXXXX 182 RKRKEVVYADTLSDLQW +AVE+ QD+ KLS K KRRD S AQAS+DIGA Sbjct: 86 RKRKEVVYADTLSDLQWMKAVESAQDMPKLSVKRKRRD-----SDAQASDDIGAEERLLE 140 Query: 183 XXXXXXXXX-DTFNVTPASKRLKHDEINSQKREKEDVRFSGSNEHMFSWNTHRKKRSSYI 359 DTFNVTPASKR KH+E+NSQ E EDVR G NE++FSWNT +KKRSSY+ Sbjct: 141 LRNGSERSSEDTFNVTPASKRPKHEELNSQNHENEDVRVGGLNENVFSWNTKKKKRSSYL 200 Query: 360 GQGSLSDNRGQNSNG 404 QGSLSD +GQNSNG Sbjct: 201 SQGSLSDTKGQNSNG 215 >ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula] gi|355512013|gb|AES93636.1| Chromatin remodeling complex subunit [Medicago truncatula] Length = 1063 Score = 162 bits (410), Expect = 6e-38 Identities = 84/137 (61%), Positives = 97/137 (70%), Gaps = 3/137 (2%) Frame = +3 Query: 3 RKRKEVVYADTLSDLQWTRAVENGQDISKLSAKGKRRDRLPVDSHAQASEDIGAXXXXXX 182 R RKEVVYADTLSDLQW +AVE+G D+S SAKGKR+ RLP+DSHAQ S+D GA Sbjct: 923 RPRKEVVYADTLSDLQWMKAVESGHDVSNSSAKGKRKIRLPIDSHAQTSDDTGAEERLLE 982 Query: 183 XXXXXXXXX---DTFNVTPASKRLKHDEINSQKREKEDVRFSGSNEHMFSWNTHRKKRSS 353 DTF TPASKR KH+E++S K E +D SG NEH+FSWNT RKKRSS Sbjct: 983 LSNTMANERSNEDTFYGTPASKRFKHEEVSSHKHEIKDTGVSGLNEHVFSWNTIRKKRSS 1042 Query: 354 YIGQGSLSDNRGQNSNG 404 Y QGSLSD +GQ+SNG Sbjct: 1043 YPSQGSLSDTKGQSSNG 1059 >ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max] Length = 1072 Score = 147 bits (371), Expect = 2e-33 Identities = 85/164 (51%), Positives = 98/164 (59%), Gaps = 5/164 (3%) Frame = +3 Query: 3 RKRKEVVYADTLSDLQWTRAVENGQDISKLSAKGKRRDRLPVDSHAQASEDIGA-----X 167 RKRKEVVYADTLSDLQW +AVENG+DISK S KGKRRD DS AQAS++ GA Sbjct: 930 RKRKEVVYADTLSDLQWMKAVENGEDISKFSGKGKRRDHRSSDSVAQASDNTGAEESLEL 989 Query: 168 XXXXXXXXXXXXXXDTFNVTPASKRLKHDEINSQKREKEDVRFSGSNEHMFSWNTHRKKR 347 D+F+VTP +KR K + N K EDV SG N H+ SWNTH+KKR Sbjct: 990 RTESVPMENERTSEDSFHVTPPAKRFKPEGTNFLKHTYEDVG-SGLNRHLLSWNTHKKKR 1048 Query: 348 SSYIGQGSLSDNRGQNSNGXXXXXXXXXXXXXXXXXXNGRANWN 479 SS++GQGSLSD RG +S NGRANWN Sbjct: 1049 SSFLGQGSLSDTRGHSS--------------------NGRANWN 1072 >ref|XP_003592449.1| Chromatin remodeling complex subunit [Medicago truncatula] gi|355481497|gb|AES62700.1| Chromatin remodeling complex subunit [Medicago truncatula] Length = 1083 Score = 143 bits (361), Expect = 3e-32 Identities = 83/168 (49%), Positives = 102/168 (60%), Gaps = 9/168 (5%) Frame = +3 Query: 3 RKRKEVVYADTLSDLQWTRAVENGQDISKLSAKGKRR---DRLPVDSHAQASEDIGAXXX 173 RKRK+V+YADTLS+LQW +A+ENG D+SKLSAKGKRR D L DS AQAS+D GA Sbjct: 936 RKRKDVIYADTLSELQWMQAMENGGDMSKLSAKGKRRESRDHLSSDSIAQASDDTGADES 995 Query: 174 XXXXXXXXXXXX------DTFNVTPASKRLKHDEINSQKREKEDVRFSGSNEHMFSWNTH 335 D+F+VTP+SKR K + N QK EDV SG ++ +FSWN H Sbjct: 996 ILQSRAKIVPTENDRTWEDSFHVTPSSKRFKPEGTNFQKHAHEDVSGSGLDQPVFSWNIH 1055 Query: 336 RKKRSSYIGQGSLSDNRGQNSNGXXXXXXXXXXXXXXXXXXNGRANWN 479 +KKRSS++GQGS S++RG NS NGRANWN Sbjct: 1056 KKKRSSHLGQGSASESRGHNS--------------------NGRANWN 1083