BLASTX nr result

ID: Glycyrrhiza23_contig00022871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022871
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94...   263   8e-69
ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicag...   255   3e-66
ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicag...   245   3e-63
ref|XP_003625399.1| Pleiotropic drug resistance protein [Medicag...   245   3e-63
ref|XP_003625361.1| Pleiotropic drug resistance protein [Medicag...   244   7e-63

>ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94732079|emb|CAK03587.1|
            PDR-like ABC-transporter [Glycine max]
          Length = 1447

 Score =  263 bits (673), Expect = 8e-69
 Identities = 124/157 (78%), Positives = 139/157 (88%)
 Frame = +2

Query: 2    GQNAIVNNEFLGKRWRHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 181
            GQNA+VNNEFLGKRWRH LPNSTE LGVE+LKSRGFFT+SYWYWIGVGALIGYTLLFNFG
Sbjct: 705  GQNAMVNNEFLGKRWRHFLPNSTEALGVEILKSRGFFTQSYWYWIGVGALIGYTLLFNFG 764

Query: 182  YILALTYLNPLGKHRGVKPVEPQSNEQTGGSQKGSNVLKHIKHSFSQHSNKVRNGESISG 361
            YILALTYLNPLGKH+ V   EPQ N+Q+G S+KG+NVLK+I+ SFSQHSN+VRNG+S+SG
Sbjct: 765  YILALTYLNPLGKHQAVISEEPQINDQSGDSKKGTNVLKNIQRSFSQHSNRVRNGKSLSG 824

Query: 362  SNDGENNHGRRRGMVLPYEPHSITFDEVTYSVDMPQE 472
            S   E NH R RGM+LP E HSITFD+VTYSVDMP E
Sbjct: 825  STSPETNHNRTRGMILPSETHSITFDDVTYSVDMPVE 861


>ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500416|gb|AES81619.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1483

 Score =  255 bits (651), Expect = 3e-66
 Identities = 125/165 (75%), Positives = 140/165 (84%), Gaps = 8/165 (4%)
 Frame = +2

Query: 2    GQNAIVNNEFLGKRWRHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 181
            GQNA+VNNEFLG +W+HVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG
Sbjct: 732  GQNAMVNNEFLGNKWKHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 791

Query: 182  YILALTYLNPLGKHRGVKPVEPQSNEQTGGSQKGSNVLKHIKHSFSQHSNKVRNGESISG 361
            Y+LALT+LNPLGKH+ V P + QS+E+ GGS++ SNVL+ IK  FSQ +NKVRNGES SG
Sbjct: 792  YMLALTFLNPLGKHQTVIPDDSQSSEKIGGSRERSNVLRFIKDGFSQITNKVRNGESRSG 851

Query: 362  SND--------GENNHGRRRGMVLPYEPHSITFDEVTYSVDMPQE 472
            S           E NH R+RGMVLP+EPHSITFDEVTYSVDMPQE
Sbjct: 852  SISPIRQEIVASETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQE 896


>ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500415|gb|AES81618.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1398

 Score =  245 bits (625), Expect = 3e-63
 Identities = 125/182 (68%), Positives = 138/182 (75%), Gaps = 25/182 (13%)
 Frame = +2

Query: 2    GQNAIVNNEFLGKRWRHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 181
            GQNA+VNNEFLG +W+HVLPNST+P+GVEVLKSRG+FTESYWYWIGVGALIGYTLLFNFG
Sbjct: 702  GQNAMVNNEFLGNKWKHVLPNSTDPIGVEVLKSRGYFTESYWYWIGVGALIGYTLLFNFG 761

Query: 182  YILALTYLN-------------PLGKHRGVKPVEPQSNEQTGGSQKGSNVLKHIKHSFSQ 322
            YILALT+LN              LGKH+ V P E QS+ Q GG +K +NVLK IK SFSQ
Sbjct: 762  YILALTFLNREYLHLRCVIKQMTLGKHQTVIPDESQSDGQIGGGRKRTNVLKFIKDSFSQ 821

Query: 323  HSNKVRNGESISGSND------------GENNHGRRRGMVLPYEPHSITFDEVTYSVDMP 466
            HSNKVRNGE  SGS               E NH R+RGMVLP+EPHSITFDEVTYSVDMP
Sbjct: 822  HSNKVRNGEIRSGSTSPSTSSDRQERVAAETNHSRKRGMVLPFEPHSITFDEVTYSVDMP 881

Query: 467  QE 472
            QE
Sbjct: 882  QE 883


>ref|XP_003625399.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500414|gb|AES81617.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1469

 Score =  245 bits (625), Expect = 3e-63
 Identities = 125/182 (68%), Positives = 138/182 (75%), Gaps = 25/182 (13%)
 Frame = +2

Query: 2    GQNAIVNNEFLGKRWRHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 181
            GQNA+VNNEFLG +W+HVLPNST+P+GVEVLKSRG+FTESYWYWIGVGALIGYTLLFNFG
Sbjct: 702  GQNAMVNNEFLGNKWKHVLPNSTDPIGVEVLKSRGYFTESYWYWIGVGALIGYTLLFNFG 761

Query: 182  YILALTYLN-------------PLGKHRGVKPVEPQSNEQTGGSQKGSNVLKHIKHSFSQ 322
            YILALT+LN              LGKH+ V P E QS+ Q GG +K +NVLK IK SFSQ
Sbjct: 762  YILALTFLNREYLHLRCVIKQMTLGKHQTVIPDESQSDGQIGGGRKRTNVLKFIKDSFSQ 821

Query: 323  HSNKVRNGESISGSND------------GENNHGRRRGMVLPYEPHSITFDEVTYSVDMP 466
            HSNKVRNGE  SGS               E NH R+RGMVLP+EPHSITFDEVTYSVDMP
Sbjct: 822  HSNKVRNGEIRSGSTSPSTSSDRQERVAAETNHSRKRGMVLPFEPHSITFDEVTYSVDMP 881

Query: 467  QE 472
            QE
Sbjct: 882  QE 883


>ref|XP_003625361.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500376|gb|AES81579.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1500

 Score =  244 bits (622), Expect = 7e-63
 Identities = 121/165 (73%), Positives = 133/165 (80%), Gaps = 8/165 (4%)
 Frame = +2

Query: 2    GQNAIVNNEFLGKRWRHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFG 181
            GQNA+VNNEFLG +W+HVLPNSTE LGVEVLKSR FFTE+YWYWI VGALIGYTLLFNFG
Sbjct: 738  GQNAMVNNEFLGNKWKHVLPNSTESLGVEVLKSRSFFTETYWYWICVGALIGYTLLFNFG 797

Query: 182  YILALTYLNPLGKHRGVKPVEPQSNEQTGGSQKGSNVLKHIKHSFSQHSNKVRNGESISG 361
            YILALT+LNPLGKH+ V P E QSNEQ GGSQK +N LK IK  FS+ SNKV+ GES  G
Sbjct: 798  YILALTFLNPLGKHQAVIPDESQSNEQIGGSQKRTNALKFIKDGFSKLSNKVKKGESRRG 857

Query: 362  SND--------GENNHGRRRGMVLPYEPHSITFDEVTYSVDMPQE 472
            S             NH R++GMVLP+EPHSITFDEVTYSVDMPQE
Sbjct: 858  SISPSRQEIVAAATNHSRKKGMVLPFEPHSITFDEVTYSVDMPQE 902


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