BLASTX nr result
ID: Glycyrrhiza23_contig00022787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00022787
(385 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containi... 231 5e-59
ref|XP_002525440.1| pentatricopeptide repeat-containing protein,... 149 2e-34
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-34
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi... 147 9e-34
emb|CBI29931.3| unnamed protein product [Vitis vinifera] 147 9e-34
>ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 231 bits (589), Expect = 5e-59
Identities = 104/127 (81%), Positives = 118/127 (92%)
Frame = +3
Query: 3 QTYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDD 182
QTYLWLL+GC++SG FSDGWKLHGKILKMGFCAEVVLCERLMDLY A GDLDGAV VFD+
Sbjct: 69 QTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDE 128
Query: 183 MPVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHF 362
MPVRPLSCWN++LHRFVAGK+AGRV+GLFRRM++E V+PDE+T+AGVLRGC G VPFH
Sbjct: 129 MPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHC 188
Query: 363 VEQIHAR 383
VE+IHAR
Sbjct: 189 VEKIHAR 195
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/126 (26%), Positives = 62/126 (49%)
Frame = +3
Query: 6 TYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDM 185
TY +L C + + G ++H ++LK GF V + L+D+Y +G LD A+K+F +
Sbjct: 475 TYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL 534
Query: 186 PVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHFV 365
+ + W ++ + + + LF+ M + + D FA + C+G +
Sbjct: 535 KEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAG-IQALNQG 593
Query: 366 EQIHAR 383
+QIHA+
Sbjct: 594 QQIHAQ 599
Score = 57.4 bits (137), Expect = 1e-06
Identities = 32/107 (29%), Positives = 54/107 (50%)
Frame = +3
Query: 18 LLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRP 197
+L C + G +LHG +LK GF E +C L+ LY +G+ A +VF+ M R
Sbjct: 277 VLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336
Query: 198 LSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCS 338
+N ++ + + + LF++M + ++PD T A +L CS
Sbjct: 337 EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383
>ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535253|gb|EEF36930.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 878
Score = 149 bits (377), Expect = 2e-34
Identities = 72/126 (57%), Positives = 91/126 (72%)
Frame = +3
Query: 3 QTYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDD 182
QTYLWLL+ C+ S SF D KLH KILK+GF E VLC++L++ YFA+GDL+ VKVFDD
Sbjct: 88 QTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDD 147
Query: 183 MPVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHF 362
MP R L WN++L VA K + RV+GLF +M++ENV P+E T A VLR V F++
Sbjct: 148 MPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYY 207
Query: 363 VEQIHA 380
VEQIHA
Sbjct: 208 VEQIHA 213
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/122 (28%), Positives = 58/122 (47%)
Frame = +3
Query: 18 LLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRP 197
LL C + S S G +LH +K G C ++++ L+DLY D+ A K F
Sbjct: 397 LLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTEN 456
Query: 198 LSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHFVEQIH 377
+ WN +L + + +FR+M E + P++ T+ +LR C+ EQIH
Sbjct: 457 VVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGA-LDLGEQIH 515
Query: 378 AR 383
++
Sbjct: 516 SQ 517
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/98 (29%), Positives = 51/98 (52%)
Frame = +3
Query: 45 SFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRPLSCWNRILH 224
+ G ++H I+K GF +E+ + L+ LY G +DGA + F ++P + WN ++
Sbjct: 709 NIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMIT 768
Query: 225 RFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCS 338
+ V LF++M + +P+ TF GV+ CS
Sbjct: 769 GYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACS 806
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = +3
Query: 18 LLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRP 197
+L C F G +LH + K GF E +C L+ LY +G+ A +VF + +
Sbjct: 296 VLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKD 355
Query: 198 LSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCS 338
+N ++ + R + LF++M ++++PD T A +L C+
Sbjct: 356 EVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACA 402
>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
predicted protein [Populus trichocarpa]
Length = 989
Score = 149 bits (377), Expect = 2e-34
Identities = 70/127 (55%), Positives = 94/127 (74%)
Frame = +3
Query: 3 QTYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDD 182
QTY+WLL+ C+ SGS + KLHGKILK+GF E VLC +L+D+YFA+GDLDG VKVF+D
Sbjct: 11 QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFED 70
Query: 183 MPVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHF 362
MP R + W++I+ F+ K++ RV+ LF M++ENV P E +FA VLR CSG+ + +
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130
Query: 363 VEQIHAR 383
EQIHAR
Sbjct: 131 AEQIHAR 137
Score = 55.1 bits (131), Expect = 6e-06
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +3
Query: 18 LLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRP 197
LL C ++G+ G +LH ++K G +++++ L+DLY D+ A ++F
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379
Query: 198 LSCWNRILHRFVAGKL--AGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHFVEQ 371
+ WN +L F GKL +FR+M + + P++ T+ +LR C+ + EQ
Sbjct: 380 VVLWNVMLVAF--GKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT-SVGALDLGEQ 436
Query: 372 IHAR 383
IH +
Sbjct: 437 IHTQ 440
>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 147 bits (371), Expect = 9e-34
Identities = 70/127 (55%), Positives = 87/127 (68%)
Frame = +3
Query: 3 QTYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDD 182
QTYLWL EGC SGS D KLH +I K GF E VL RL+D+Y A G++D A+K+FDD
Sbjct: 11 QTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDD 70
Query: 183 MPVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHF 362
+P +S WN+++ +A KLA +V+GLF M+ ENV PDE TFA VLR CSG PF
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 363 VEQIHAR 383
EQIHA+
Sbjct: 131 TEQIHAK 137
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/126 (25%), Positives = 60/126 (47%)
Frame = +3
Query: 6 TYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDM 185
TY +L C + G+ G ++H +++K GF V +C L+D+Y G+LD A + +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 186 PVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHFV 365
+ W ++ + L + LF+ M + + D F+ + C+G +
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG-IQALNQG 535
Query: 366 EQIHAR 383
+QIHA+
Sbjct: 536 QQIHAQ 541
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/100 (27%), Positives = 48/100 (48%)
Frame = +3
Query: 39 SGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDMPVRPLSCWNRI 218
+ + G ++H ++K G+ +E L+ LY G ++ A + F +MP + + WN +
Sbjct: 630 TANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAM 689
Query: 219 LHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCS 338
+ + V LF M + + P+ TF GVL CS
Sbjct: 690 ITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACS 729
>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 147 bits (371), Expect = 9e-34
Identities = 70/127 (55%), Positives = 87/127 (68%)
Frame = +3
Query: 3 QTYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDD 182
QTYLWL EGC SGS D KLH +I K GF E VL RL+D+Y A G++D A+K+FDD
Sbjct: 11 QTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDD 70
Query: 183 MPVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHF 362
+P +S WN+++ +A KLA +V+GLF M+ ENV PDE TFA VLR CSG PF
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 363 VEQIHAR 383
EQIHA+
Sbjct: 131 TEQIHAK 137
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/126 (25%), Positives = 60/126 (47%)
Frame = +3
Query: 6 TYLWLLEGCITSGSFSDGWKLHGKILKMGFCAEVVLCERLMDLYFAIGDLDGAVKVFDDM 185
TY +L C + G+ G ++H +++K GF V +C L+D+Y G+LD A + +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 186 PVRPLSCWNRILHRFVAGKLAGRVVGLFRRMMKENVEPDEKTFAGVLRGCSGNAVPFHFV 365
+ W ++ + L + LF+ M + + D F+ + C+G +
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG-IQALNQG 535
Query: 366 EQIHAR 383
+QIHA+
Sbjct: 536 QQIHAQ 541