BLASTX nr result
ID: Glycyrrhiza23_contig00022784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00022784
(615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei... 358 5e-97
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 253 2e-65
emb|CBI34863.3| unnamed protein product [Vitis vinifera] 253 2e-65
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu... 234 7e-60
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei... 229 3e-58
>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 358 bits (918), Expect = 5e-97
Identities = 171/204 (83%), Positives = 190/204 (93%)
Frame = +2
Query: 2 GSSFHASQFVYMNLHVHVEESIIELVDIDNFSSLVGGHVNAPSFKMKGKYLGITTLYVST 181
G++FHASQFVYMNLHVHVE+SIIELVD ++FSSLVGGHVNAPSFK+KG++LGITTLYVS
Sbjct: 1060 GNNFHASQFVYMNLHVHVEDSIIELVDTEDFSSLVGGHVNAPSFKIKGRHLGITTLYVSA 1119
Query: 182 MQRFGHVVQTQTITVEVYKAPRIHPHELFLLPGASYVLTMEGGPSLGVHVEYAIENDKIA 361
+Q GHV+Q+Q I VEVY APRIHPH++FLLPGASYVLTMEGGP+LGVHVEY I+NDKIA
Sbjct: 1120 IQHLGHVIQSQAIKVEVYAAPRIHPHDIFLLPGASYVLTMEGGPTLGVHVEYEIDNDKIA 1179
Query: 362 NIDRYSGRLSAISVGNSTILASVFVNGNTVICEARSILRVGVPSTVTLHVQSEQLGIGRK 541
+IDRYSGRL A S+GN+TI+ASVF NGNTVICEARS LRVGVPSTVTLHVQSEQLGIGRK
Sbjct: 1180 SIDRYSGRLLASSIGNTTIIASVFANGNTVICEARSFLRVGVPSTVTLHVQSEQLGIGRK 1239
Query: 542 LPIYPLFPEGNLFSFYELCKNYQW 613
LPIYPLFPEG L SFYELCKNYQW
Sbjct: 1240 LPIYPLFPEGTLSSFYELCKNYQW 1263
>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 253 bits (646), Expect = 2e-65
Identities = 119/205 (58%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 GSSFHASQFVYMNLHVHVEESIIELVDIDN-FSSLVGGHVNAPSFKMKGKYLGITTLYVS 178
GS+F ASQ+VYMN+ VH+E+ I++LVD DN SS+ GG+VN+P F + K+LG+T LYVS
Sbjct: 1152 GSTFDASQYVYMNIQVHIEDHIVDLVDDDNDISSIGGGYVNSPKFMILAKHLGVTILYVS 1211
Query: 179 TMQRFGHVVQTQTITVEVYKAPRIHPHELFLLPGASYVLTMEGGPSLGVHVEYAIENDKI 358
Q G+ + + I VEVY PRIHP ++FL+PGA+YVL ++GGP +GV +EYA +D+I
Sbjct: 1212 ARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGVVIEYASLDDRI 1271
Query: 359 ANIDRYSGRLSAISVGNSTILASVFVNGNTVICEARSILRVGVPSTVTLHVQSEQLGIGR 538
A +++ SGRLSAIS GNST++A+V+ G+TVIC+A ++VGVPS VTL+VQSEQL +GR
Sbjct: 1272 ATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYGRIKVGVPSLVTLNVQSEQLDVGR 1331
Query: 539 KLPIYPLFPEGNLFSFYELCKNYQW 613
++PI+P P+G+LFSFYELCKNY+W
Sbjct: 1332 EMPIFPSLPQGDLFSFYELCKNYKW 1356
>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
Length = 1961
Score = 253 bits (646), Expect = 2e-65
Identities = 119/205 (58%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 GSSFHASQFVYMNLHVHVEESIIELVDIDN-FSSLVGGHVNAPSFKMKGKYLGITTLYVS 178
GS+F ASQ+VYMN+ VH+E+ I++LVD DN SS+ GG+VN+P F + K+LG+T LYVS
Sbjct: 1077 GSTFDASQYVYMNIQVHIEDHIVDLVDDDNDISSIGGGYVNSPKFMILAKHLGVTILYVS 1136
Query: 179 TMQRFGHVVQTQTITVEVYKAPRIHPHELFLLPGASYVLTMEGGPSLGVHVEYAIENDKI 358
Q G+ + + I VEVY PRIHP ++FL+PGA+YVL ++GGP +GV +EYA +D+I
Sbjct: 1137 ARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGVVIEYASLDDRI 1196
Query: 359 ANIDRYSGRLSAISVGNSTILASVFVNGNTVICEARSILRVGVPSTVTLHVQSEQLGIGR 538
A +++ SGRLSAIS GNST++A+V+ G+TVIC+A ++VGVPS VTL+VQSEQL +GR
Sbjct: 1197 ATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYGRIKVGVPSLVTLNVQSEQLDVGR 1256
Query: 539 KLPIYPLFPEGNLFSFYELCKNYQW 613
++PI+P P+G+LFSFYELCKNY+W
Sbjct: 1257 EMPIFPSLPQGDLFSFYELCKNYKW 1281
>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative
[Ricinus communis]
Length = 2256
Score = 234 bits (598), Expect = 7e-60
Identities = 114/204 (55%), Positives = 155/204 (75%)
Frame = +2
Query: 2 GSSFHASQFVYMNLHVHVEESIIELVDIDNFSSLVGGHVNAPSFKMKGKYLGITTLYVST 181
G +F SQ+ YM +HV +E+ I+EL +N S+L GG+V P FK+ K LGITTLYVS
Sbjct: 1068 GRTFDPSQYKYMEIHVWIEDDIVELTG-NNVSNLGGGYVLGPKFKIIAKDLGITTLYVSA 1126
Query: 182 MQRFGHVVQTQTITVEVYKAPRIHPHELFLLPGASYVLTMEGGPSLGVHVEYAIENDKIA 361
Q+ GH + +Q I +EVY R+HP ++FL+PG+SYVLT++GGP++GV+VEYA +D IA
Sbjct: 1127 KQQSGHEILSQPIKIEVYAPLRVHPQDIFLVPGSSYVLTVKGGPTIGVYVEYASLDDGIA 1186
Query: 362 NIDRYSGRLSAISVGNSTILASVFVNGNTVICEARSILRVGVPSTVTLHVQSEQLGIGRK 541
+DR SG+LS IS GN+TIL++V+ NG+ VIC+A ++VGVPS+ L+VQSEQL +GR
Sbjct: 1187 TVDRSSGQLSGISPGNTTILSTVYGNGDVVICQAYGDVKVGVPSSAMLNVQSEQLDVGRN 1246
Query: 542 LPIYPLFPEGNLFSFYELCKNYQW 613
+PIYP F EG+LFS YELCK Y+W
Sbjct: 1247 VPIYPSFLEGDLFSIYELCKKYKW 1270
>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 229 bits (584), Expect = 3e-58
Identities = 108/204 (52%), Positives = 147/204 (72%)
Frame = +2
Query: 2 GSSFHASQFVYMNLHVHVEESIIELVDIDNFSSLVGGHVNAPSFKMKGKYLGITTLYVST 181
GS+F +SQF YM++ VH+E+ I+ELVD D+ G V A FK+K LG TTLYVS
Sbjct: 1060 GSTFDSSQFAYMHILVHIEDQIVELVDTDDSRITGHGVVKASGFKIKAVSLGTTTLYVSI 1119
Query: 182 MQRFGHVVQTQTITVEVYKAPRIHPHELFLLPGASYVLTMEGGPSLGVHVEYAIENDKIA 361
+Q+ G + ++ IT+EVY PR+HPH +FLLPGASY LT+EGGP++G +VE+A ++ I
Sbjct: 1120 LQQSGREILSEPITIEVYALPRVHPHSIFLLPGASYTLTVEGGPTVGTYVEFASLDNAIV 1179
Query: 362 NIDRYSGRLSAISVGNSTILASVFVNGNTVICEARSILRVGVPSTVTLHVQSEQLGIGRK 541
N+ + SG L A+S G S I A+ F G ++IC +RVG+PS V L+VQ+EQLG+G +
Sbjct: 1180 NVHKSSGLLLAVSSGKSNISATFFRYGGSMICRTYGSIRVGIPSNVLLNVQNEQLGVGNE 1239
Query: 542 LPIYPLFPEGNLFSFYELCKNYQW 613
+PIYPLFPEG+ FSFY+LCK Y W
Sbjct: 1240 MPIYPLFPEGDAFSFYQLCKGYNW 1263