BLASTX nr result

ID: Glycyrrhiza23_contig00022734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022734
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242178.1| uncharacterized protein LOC100812874 [Glycin...   142   4e-32
ref|XP_003624798.1| Dihydrofolate reductase [Medicago truncatula...   136   2e-30
ref|XP_003554076.1| PREDICTED: dihydrofolate reductase-like [Gly...   131   6e-29
gb|AFK38495.1| unknown [Medicago truncatula]                          129   2e-28
ref|XP_002307937.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|NP_001242178.1| uncharacterized protein LOC100812874 [Glycine max]
           gi|255639861|gb|ACU20223.1| unknown [Glycine max]
          Length = 228

 Score =  142 bits (357), Expect = 4e-32
 Identities = 77/104 (74%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
 Frame = -3

Query: 503 LKLPSEDLASAFDKPLIIRHPQGHIVPRLDEVTAGQLQNWVA-EILRQPTVGVSTSGEHE 327
           LKLPSEDL SAFDKPLIIRHPQGH VPRLDEV   QL+ W+  E+L QP VG+S   EHE
Sbjct: 128 LKLPSEDLTSAFDKPLIIRHPQGHTVPRLDEVATSQLRKWITEEVLCQPKVGISVC-EHE 186

Query: 326 INHEEKKSEVEGTKVEVDSTNQDKGVNGVEINKGDAETVEVAQA 195
            +HEEKKSE +GTK+E   TNQDKGVNGVEINKG +ETVEVAQA
Sbjct: 187 TDHEEKKSE-KGTKLEPCGTNQDKGVNGVEINKG-SETVEVAQA 228


>ref|XP_003624798.1| Dihydrofolate reductase [Medicago truncatula]
           gi|355499813|gb|AES81016.1| Dihydrofolate reductase
           [Medicago truncatula]
          Length = 257

 Score =  136 bits (342), Expect = 2e-30
 Identities = 74/103 (71%), Positives = 81/103 (78%)
 Frame = -3

Query: 503 LKLPSEDLASAFDKPLIIRHPQGHIVPRLDEVTAGQLQNWVAEILRQPTVGVSTSGEHEI 324
           LK+PSE+LASAFDKPLIIRHPQGH VPRLDEV+ GQLQN+VAEIL QP VGVS   EHE 
Sbjct: 168 LKIPSEELASAFDKPLIIRHPQGHTVPRLDEVSTGQLQNFVAEILSQPKVGVSIC-EHE- 225

Query: 323 NHEEKKSEVEGTKVEVDSTNQDKGVNGVEINKGDAETVEVAQA 195
                      +KVEVD TN DKGVNGVEIN+G+AETVEV QA
Sbjct: 226 -----------SKVEVDGTNGDKGVNGVEINQGNAETVEVVQA 257


>ref|XP_003554076.1| PREDICTED: dihydrofolate reductase-like [Glycine max]
          Length = 268

 Score =  131 bits (329), Expect = 6e-29
 Identities = 74/104 (71%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = -3

Query: 503 LKLPSEDLASAFDKPLIIRHPQGHIVPRLDEVTAGQLQNWVA-EILRQPTVGVSTSGEHE 327
           LKLPSEDLASAFDKP IIRHPQGH VPRLDEV   QL+ W+  E+L QP V VS   E E
Sbjct: 168 LKLPSEDLASAFDKPFIIRHPQGHTVPRLDEVAISQLRKWITEEVLCQPKVEVSVC-ERE 226

Query: 326 INHEEKKSEVEGTKVEVDSTNQDKGVNGVEINKGDAETVEVAQA 195
            +HEEK SE + TK+E   TNQDKGVNGVEINKG +ETVEVAQA
Sbjct: 227 TDHEEKMSE-KTTKIEPCGTNQDKGVNGVEINKG-SETVEVAQA 268


>gb|AFK38495.1| unknown [Medicago truncatula]
          Length = 257

 Score =  129 bits (325), Expect = 2e-28
 Identities = 72/103 (69%), Positives = 78/103 (75%)
 Frame = -3

Query: 503 LKLPSEDLASAFDKPLIIRHPQGHIVPRLDEVTAGQLQNWVAEILRQPTVGVSTSGEHEI 324
           LK+P E+LASAFDKPLIIRHPQG  VPRLDEV  GQLQN+VAEIL QP VGVS   EHE 
Sbjct: 168 LKIPFEELASAFDKPLIIRHPQGRTVPRLDEVFTGQLQNFVAEILSQPKVGVSIC-EHE- 225

Query: 323 NHEEKKSEVEGTKVEVDSTNQDKGVNGVEINKGDAETVEVAQA 195
                      +KVEVD TN DKGVNGVEIN+G+AETVEV QA
Sbjct: 226 -----------SKVEVDGTNGDKGVNGVEINQGNAETVEVVQA 257


>ref|XP_002307937.1| predicted protein [Populus trichocarpa] gi|222853913|gb|EEE91460.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/103 (48%), Positives = 63/103 (61%)
 Frame = -3

Query: 503 LKLPSEDLASAFDKPLIIRHPQGHIVPRLDEVTAGQLQNWVAEILRQPTVGVSTSGEHEI 324
           LK PSEDLA+AFD PLIIRHPQGH VPRLDE    QL+ W  EIL         +GE ++
Sbjct: 169 LKEPSEDLATAFDSPLIIRHPQGHTVPRLDEAATEQLRAWATEILSYN--NKILNGETKV 226

Query: 323 NHEEKKSEVEGTKVEVDSTNQDKGVNGVEINKGDAETVEVAQA 195
           + EEKK E    K++     QD G+ G+E+ +     VEV +A
Sbjct: 227 DDEEKKPEEVSNKIDTTQVQQD-GI-GIELKR----EVEVVKA 263


Top