BLASTX nr result

ID: Glycyrrhiza23_contig00022727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022727
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614030.1| Pentatricopeptide repeat-containing protein ...   196   2e-48
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_003533540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   172   3e-41
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...   156   2e-36
ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...   154   7e-36

>ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515365|gb|AES96988.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/103 (90%), Positives = 99/103 (96%)
 Frame = +2

Query: 2   VWRTLLSACTVHDVHDRTGIGDEVRKRLLRMEPRRGGNLVIVANMYAEVGKWEKAANVRR 181
           VWRTLLSACTVHDV DRTGIGD+VRKRLL MEP+RGGNLVIVANMYAEVG WEKAANVRR
Sbjct: 386 VWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRR 445

Query: 182 VMRDGGMKKISGESCVDLGGSMYRFFAGYDSRPDLMPVYHLLD 310
           VMRDGG+KK++GESCVDLGGSMYRFFAG+DSRPDLMPVY LLD
Sbjct: 446 VMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDLLD 488


>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Glycine max]
          Length = 505

 Score =  190 bits (482), Expect = 1e-46
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +2

Query: 2   VWRTLLSACTVHDVHDRTGIGDEVRKRLLRMEPRRGGNLVIVANMYAEVGKWEKAANVRR 181
           VWRTLLSACTVHDVHD TGIG+ V K+LL  EPRRGGNLVIVANMYAEVG WE+AANVRR
Sbjct: 393 VWRTLLSACTVHDVHDHTGIGERVSKKLLLKEPRRGGNLVIVANMYAEVGMWEEAANVRR 452

Query: 182 VMRDGGMKKISGESCVDLGGSMYRFFAGYDSRPDLMPVYHLLDG 313
           VMRDGGMKK++GESCVDLGGSM+RFFAGYD  PDL+PVYHLLDG
Sbjct: 453 VMRDGGMKKVAGESCVDLGGSMHRFFAGYDPCPDLVPVYHLLDG 496


>ref|XP_003533540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g36730-like [Glycine max]
          Length = 407

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/104 (78%), Positives = 90/104 (86%)
 Frame = +2

Query: 2   VWRTLLSACTVHDVHDRTGIGDEVRKRLLRMEPRRGGNLVIVANMYAEVGKWEKAANVRR 181
           VWRTLLSACTVHDVHD TG+G+ VRK+LL MEPRRGGNLVIVANM+AEV  WEKAANV  
Sbjct: 297 VWRTLLSACTVHDVHDXTGVGERVRKKLLLMEPRRGGNLVIVANMFAEVEMWEKAANVGH 356

Query: 182 VMRDGGMKKISGESCVDLGGSMYRFFAGYDSRPDLMPVYHLLDG 313
               GGMKK++GESC DLGGSM+RFFAGYD  PDL+PVYHLLDG
Sbjct: 357 --ESGGMKKVAGESCADLGGSMHRFFAGYDPCPDLVPVYHLLDG 398


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 1157

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = +2

Query: 2    VWRTLLSACTVHDVHDRTGIGDEVRKRLLRMEPRRGGNLVIVANMYAEVGKWEKAANVRR 181
            VWRTLLSAC++HDV D TG+  +VRKRLL +EPRR GN V+VANMYA+ G WEKAA VRR
Sbjct: 1037 VWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRR 1096

Query: 182  VMRDGGMKKISGESCVDLGGSMYRFFAGYDSRPDLMPVYHLLDG 313
            VMRDGG+KK +GESCV+L GS++RFF+GYDS+ D   +Y LLDG
Sbjct: 1097 VMRDGGLKKKAGESCVELSGSIHRFFSGYDSQDDKEGMYQLLDG 1140


>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/104 (66%), Positives = 88/104 (84%)
 Frame = +2

Query: 2    VWRTLLSACTVHDVHDRTGIGDEVRKRLLRMEPRRGGNLVIVANMYAEVGKWEKAANVRR 181
            VWRTLLSACT+H ++D  G+GD+VRKRLL +EPRR GN V+VANMYAEVGKW+KAANVRR
Sbjct: 1032 VWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRR 1091

Query: 182  VMRDGGMKKISGESCVDLGGSMYRFFAGYDSRPDLMPVYHLLDG 313
             M+D G+KK++GESC+++GGS++RFF+G D + D   V  LLDG
Sbjct: 1092 TMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCEDVLQLLDG 1135


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