BLASTX nr result

ID: Glycyrrhiza23_contig00022688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022688
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   138   5e-31
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   135   3e-30
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   124   6e-27
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   123   1e-26
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   117   7e-25

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = -3

Query: 205  LRSKLGIIPQDPTLFLGTVRTNLDPLEQHKDQELWEVLSKCHLAEIVKQDPRLLDAPVAE 26
            LRSKLGIIPQDPTLFLGTVRTNLDPLEQH DQELWEVLSKCHLAEIV++DPRLLDAPVAE
Sbjct: 1279 LRSKLGIIPQDPTLFLGTVRTNLDPLEQHADQELWEVLSKCHLAEIVRRDPRLLDAPVAE 1338

Query: 25   NGENWSVG 2
            NGENWSVG
Sbjct: 1339 NGENWSVG 1346


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205  LRSKLGIIPQDPTLFLGTVRTNLDPLEQHKDQELWEVLSKCHLAEIVKQDPRLLDAPVAE 26
            LRSKLGIIPQDPTLFLGTVRTNLDPLEQH+DQELWEVLSKCHLAEIV++D RLLDAPVAE
Sbjct: 1277 LRSKLGIIPQDPTLFLGTVRTNLDPLEQHEDQELWEVLSKCHLAEIVRRDQRLLDAPVAE 1336

Query: 25   NGENWSVG 2
            NGENWSVG
Sbjct: 1337 NGENWSVG 1344


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/68 (85%), Positives = 63/68 (92%)
 Frame = -3

Query: 205  LRSKLGIIPQDPTLFLGTVRTNLDPLEQHKDQELWEVLSKCHLAEIVKQDPRLLDAPVAE 26
            LRS+LGIIPQDPTLF GTVRTNLDPLEQH DQE+WEVL+KC LA+ VKQD RLLDAPVAE
Sbjct: 874  LRSRLGIIPQDPTLFQGTVRTNLDPLEQHSDQEIWEVLNKCRLADTVKQDKRLLDAPVAE 933

Query: 25   NGENWSVG 2
            +GENWSVG
Sbjct: 934  DGENWSVG 941


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/68 (83%), Positives = 64/68 (94%)
 Frame = -3

Query: 205  LRSKLGIIPQDPTLFLGTVRTNLDPLEQHKDQELWEVLSKCHLAEIVKQDPRLLDAPVAE 26
            LRSKLGIIPQDPTLF GTVRTNLDPLE+H DQE+WEVL+KC LA+IVK+D RLLDAPV+E
Sbjct: 1194 LRSKLGIIPQDPTLFRGTVRTNLDPLEKHSDQEIWEVLNKCRLADIVKRDKRLLDAPVSE 1253

Query: 25   NGENWSVG 2
            +GENWSVG
Sbjct: 1254 DGENWSVG 1261


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -3

Query: 205  LRSKLGIIPQDPTLFLGTVRTNLDPLEQHKDQELWEVLSKCHLAEIVKQDPRLLDAPVAE 26
            LRS LGIIPQDPTLF GTVRTNLDPL++H D E+WEVL KC LA+IV+QD RLL+APVAE
Sbjct: 1290 LRSGLGIIPQDPTLFQGTVRTNLDPLQEHSDHEIWEVLKKCRLADIVRQDSRLLEAPVAE 1349

Query: 25   NGENWSVG 2
            +GENWSVG
Sbjct: 1350 DGENWSVG 1357


Top