BLASTX nr result

ID: Glycyrrhiza23_contig00022681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022681
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptas...   205   4e-51
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355...   204   7e-51
ref|XP_003595465.1| hypothetical protein MTR_2g048010 [Medicago ...   199   4e-49
ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medic...   187   8e-46
ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medic...   187   8e-46

>gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
           CCHC-type; Peptidase aspartic, active site;
           Retrotransposon gag protein [Medicago truncatula]
          Length = 912

 Score =  205 bits (522), Expect = 4e-51
 Identities = 100/188 (53%), Positives = 136/188 (72%)
 Frame = -2

Query: 564 VHTPADGSISTSLMCEKCPLTIQGRVFNVDLICLPLEGMDIILGMDWLSANQVVLNCYNK 385
           V TPA GS++TSL+C KCPL++ GR F +DL+CLPL GMD+ILGM+WL  N V++NC++K
Sbjct: 371 VETPAKGSVTTSLVCLKCPLSMFGRDFEMDLVCLPLSGMDVILGMNWLEYNHVLINCFSK 430

Query: 384 TVIFPMEQPSYDKQNCHVLASVPQLNQCLVEGNIGYILLFSSISESSPDLSTIPVVNEFI 205
           +V F     S ++++     S  QL Q   +G + + L+ +   E+   +  +PVV EF 
Sbjct: 431 SVHFS----SVEEESGAEFLSTKQLKQLERDGILMFSLMATLSIENQAVIDRLPVVCEFP 486

Query: 204 DVFPEEVTSLPPEREIEFSIDLVPGAGPISIAPYRMSPLELKELKTQLEDLISKQFIRPS 25
           +VFP+E+  +PPERE+EFSIDLVPG  P+S+APYRMS  EL ELK QLEDL+ K+F+RPS
Sbjct: 487 EVFPDEIPDVPPEREVEFSIDLVPGTKPVSMAPYRMSASELSELKKQLEDLLEKKFVRPS 546

Query: 24  TSPWGAPV 1
            SPWGAPV
Sbjct: 547 VSPWGAPV 554


>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
           Pol polyprotein [Medicago truncatula]
          Length = 745

 Score =  204 bits (520), Expect = 7e-51
 Identities = 100/188 (53%), Positives = 136/188 (72%)
 Frame = -2

Query: 564 VHTPADGSISTSLMCEKCPLTIQGRVFNVDLICLPLEGMDIILGMDWLSANQVVLNCYNK 385
           V TPA GS++TSL+C KCPL++ GR F +DL+CLPL GMD+ILGM+WL  N V++NC++K
Sbjct: 382 VETPAKGSVTTSLVCLKCPLSMFGRDFEMDLVCLPLSGMDVILGMNWLEYNHVLINCFSK 441

Query: 384 TVIFPMEQPSYDKQNCHVLASVPQLNQCLVEGNIGYILLFSSISESSPDLSTIPVVNEFI 205
           +V F     S ++++     S  QL Q   +G + + L+ +   E+   +  +PVV EF 
Sbjct: 442 SVHFS----SVEEESGAEFLSTKQLKQLERDGILMFSLMPTISIENQAVIDRLPVVCEFP 497

Query: 204 DVFPEEVTSLPPEREIEFSIDLVPGAGPISIAPYRMSPLELKELKTQLEDLISKQFIRPS 25
           +VFP+E+  +PPERE+EFSIDLVPG  P+S+APYRMS  EL ELK QLEDL+ K+F+RPS
Sbjct: 498 EVFPDEIPDVPPEREVEFSIDLVPGTKPVSMAPYRMSASELSELKKQLEDLLEKKFVRPS 557

Query: 24  TSPWGAPV 1
            SPWGAPV
Sbjct: 558 VSPWGAPV 565


>ref|XP_003595465.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
           gi|355484513|gb|AES65716.1| hypothetical protein
           MTR_2g048010 [Medicago truncatula]
          Length = 468

 Score =  199 bits (505), Expect = 4e-49
 Identities = 97/187 (51%), Positives = 132/187 (70%)
 Frame = -2

Query: 564 VHTPADGSISTSLMCEKCPLTIQGRVFNVDLICLPLEGMDIILGMDWLSANQVVLNCYNK 385
           V TPA GS++TSL+C +CP+++ GR F +DL+CLPL GMD+I GM+WL  N+V +NC++K
Sbjct: 247 VETPAKGSVTTSLVCLRCPISMFGRDFVIDLVCLPLTGMDVIFGMNWLEYNRVHINCFSK 306

Query: 384 TVIFPMEQPSYDKQNCHVLASVPQLNQCLVEGNIGYILLFSSISESSPDLSTIPVVNEFI 205
           TV F   +   + +    L S  Q+ Q   +G + Y L+     E+   +  +PVVNEF 
Sbjct: 307 TVHFSSAEEEGEVE----LLSTKQMKQFERDGILMYSLMAQLSLENQAVIDGLPVVNEFP 362

Query: 204 DVFPEEVTSLPPEREIEFSIDLVPGAGPISIAPYRMSPLELKELKTQLEDLISKQFIRPS 25
           +VFP+E+  +P ERE+EFSIDLVPG  P+S+APYRMS  EL ELK QLEDL+ K+F+RPS
Sbjct: 363 EVFPDEIPDVPLEREVEFSIDLVPGTKPVSMAPYRMSASELAELKKQLEDLLDKKFVRPS 422

Query: 24  TSPWGAP 4
            SPWGAP
Sbjct: 423 VSPWGAP 429


>ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355503840|gb|AES85043.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 358

 Score =  187 bits (476), Expect = 8e-46
 Identities = 95/186 (51%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
 Frame = -2

Query: 564 VHTPADGSISTSLMCEKCPLTIQGRVFNVDLICLPLEGMDIILGMDWLSANQVVLNCYNK 385
           + TPA GS++TS MC KCP+      F +DL+CLPL+ MD+I GMDWL A  V +NC  +
Sbjct: 177 IDTPASGSVTTSFMCAKCPVNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVSINCLTR 236

Query: 384 TVIFPMEQPSYDKQNCHVLASVPQLNQCLVEGNIGYILLFSSISESSPD-LSTIPVVNEF 208
           +V F       D++      +  Q+ + L +G     ++F+S+  S    +S +PVV EF
Sbjct: 237 SVTFSKPVEELDRK----FLTAKQVKKSL-DGEACVFMMFASLKVSGEKGVSDLPVVQEF 291

Query: 207 IDVFPEEVTSLPPEREIEFSIDLVPGAGPISIAPYRMSPLELKELKTQLEDLISKQFIRP 28
            +VFPE++T LPPERE+EF+IDLVPG  PISIAPYRMS  EL ELK QLE+L+ KQFIRP
Sbjct: 292 PEVFPEDITELPPEREVEFAIDLVPGTSPISIAPYRMSASELGELKNQLEELLEKQFIRP 351

Query: 27  STSPWG 10
           S SPWG
Sbjct: 352 SVSPWG 357


>ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355477410|gb|AES58613.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 424

 Score =  187 bits (476), Expect = 8e-46
 Identities = 95/186 (51%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
 Frame = -2

Query: 564 VHTPADGSISTSLMCEKCPLTIQGRVFNVDLICLPLEGMDIILGMDWLSANQVVLNCYNK 385
           + TPA GS++TS MC KCP+      F +DL+CLPL+ MD+I GMDWL A  V +NC  +
Sbjct: 239 IDTPASGSVTTSFMCAKCPVNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVSINCLTR 298

Query: 384 TVIFPMEQPSYDKQNCHVLASVPQLNQCLVEGNIGYILLFSSISESSPD-LSTIPVVNEF 208
           +V F       D++      +  Q+ + L +G     ++F+S+  S    +S +PVV EF
Sbjct: 299 SVTFSKPVEELDRK----FLTAKQVKKSL-DGEACVFMMFASLKVSGEKGVSDLPVVQEF 353

Query: 207 IDVFPEEVTSLPPEREIEFSIDLVPGAGPISIAPYRMSPLELKELKTQLEDLISKQFIRP 28
            +VFPE++T LPPERE+EF+IDLVPG  PISIAPYRMS  EL ELK QLE+L+ KQFIRP
Sbjct: 354 PEVFPEDITELPPEREVEFAIDLVPGTSPISIAPYRMSASELGELKNQLEELLEKQFIRP 413

Query: 27  STSPWG 10
           S SPWG
Sbjct: 414 SVSPWG 419


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