BLASTX nr result

ID: Glycyrrhiza23_contig00022653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022653
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...    86   3e-15
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]    86   3e-15
ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago trunca...    78   7e-13
ref|XP_003539199.1| PREDICTED: putative DNA-binding protein ESCA...    70   3e-10
gb|AFK38460.1| unknown [Medicago truncatula]                           68   1e-09

>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = -1

Query: 491 INNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 369
           INNPFPDPS+GLPFFNLPLNM N QLPVDGWAGNS ARPPF
Sbjct: 242 INNPFPDPSAGLPFFNLPLNMPNCQLPVDGWAGNSGARPPF 282


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = -1

Query: 491 INNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 369
           INNPFPDPS+GLPFFNLPLNM N QLPVDGWAGNS ARPPF
Sbjct: 242 INNPFPDPSAGLPFFNLPLNMPNCQLPVDGWAGNSGARPPF 282


>ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago truncatula]
           gi|355509673|gb|AES90815.1| AT-hook DNA-binding protein
           [Medicago truncatula]
          Length = 285

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/46 (84%), Positives = 40/46 (86%), Gaps = 4/46 (8%)
 Frame = -1

Query: 494 NINNPFPDPSSGLPFFNLPLNMQNV-QLPVDGWAG---NSAARPPF 369
           N NNPFPDPSSGLPFFNLPLNMQNV QLPVDGWAG   NSA+R PF
Sbjct: 240 NNNNPFPDPSSGLPFFNLPLNMQNVHQLPVDGWAGNNNNSASRQPF 285


>ref|XP_003539199.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 250

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = -1

Query: 494 NINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 369
           N +NPFPDPSSGLPFFNLP+   NVQLPVD WAGNS  R PF
Sbjct: 212 NNSNPFPDPSSGLPFFNLPM---NVQLPVDAWAGNSTTRSPF 250


>gb|AFK38460.1| unknown [Medicago truncatula]
          Length = 269

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -1

Query: 491 INNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 369
           +NN FPDPSSGLPFFNLPLNM   QLPVDGWAGNS  R  +
Sbjct: 231 VNNSFPDPSSGLPFFNLPLNMP--QLPVDGWAGNSGGRQSY 269


Top