BLASTX nr result

ID: Glycyrrhiza23_contig00022630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022630
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542063.1| PREDICTED: uncharacterized protein LOC100811...    91   1e-16
ref|XP_003546981.1| PREDICTED: uncharacterized protein LOC100804...    87   1e-15
ref|XP_002534076.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
emb|CBI29559.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|NP_001189743.1| RAB GTPase activator protein [Arabidopsis th...    73   2e-11

>ref|XP_003542063.1| PREDICTED: uncharacterized protein LOC100811679 [Glycine max]
          Length = 706

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/52 (86%), Positives = 45/52 (86%), Gaps = 4/52 (7%)
 Frame = -1

Query: 146 MYCGGEDKQWSCGKAGTVNLRKVSSIVRDIGDPCLSQSPVK----VNRMLKP 3
           MYCG E KQWSCGKAG VNLRKVSSIVRDIGDPCLSQSPVK    VNRMLKP
Sbjct: 1   MYCGEEAKQWSCGKAGAVNLRKVSSIVRDIGDPCLSQSPVKVVLTVNRMLKP 52


>ref|XP_003546981.1| PREDICTED: uncharacterized protein LOC100804956 [Glycine max]
          Length = 699

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/51 (82%), Positives = 44/51 (86%), Gaps = 4/51 (7%)
 Frame = -1

Query: 146 MYCGGEDKQWSCGKAGTVNLRKVSSIVRDIGDPCLSQSPVK----VNRMLK 6
           MYCG E+KQW+CGKAG  NLRKVSSIVRDIGDPCLSQSPVK    VNRMLK
Sbjct: 1   MYCGEEEKQWTCGKAGAANLRKVSSIVRDIGDPCLSQSPVKVVVTVNRMLK 51


>ref|XP_002534076.1| conserved hypothetical protein [Ricinus communis]
           gi|223525888|gb|EEF28308.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 662

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = -1

Query: 137 GGEDKQWSCGKAGTVNLRKVSSIVRDIGDPCLSQSPVKVNRMLKP 3
           GGE+KQWSCGK G VNL++V SIVRDIG+PCL+QSP+KV+RMLKP
Sbjct: 5   GGEEKQWSCGKPGAVNLQRVGSIVRDIGEPCLAQSPIKVSRMLKP 49


>emb|CBI29559.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -1

Query: 131 EDKQWSCGKAGTVNLRKVSSIVRDIGDPCLSQSPVKVNRMLKP 3
           EDKQWSCGKA ++NL+KVS+IVRDIG+PCL QSP+KV +MLKP
Sbjct: 6   EDKQWSCGKASSMNLQKVSAIVRDIGEPCLHQSPIKVGKMLKP 48


>ref|NP_001189743.1| RAB GTPase activator protein [Arabidopsis thaliana]
           gi|330255187|gb|AEC10281.1| RAB GTPase activator protein
           [Arabidopsis thaliana]
          Length = 741

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = -1

Query: 146 MYCGGEDKQWSCGKAGTVNLRKVSSIVRDIGDPCLSQSPVKVNRMLKP 3
           M  GGE KQWSCGKAG V+L+KV S+VRD+ +PCLSQS +++ +MLKP
Sbjct: 1   MCSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQIGKMLKP 48


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