BLASTX nr result

ID: Glycyrrhiza23_contig00022629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022629
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-...   195   4e-48
ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-...   194   8e-48
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              190   9e-47
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   190   9e-47
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   190   9e-47

>ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 600

 Score =  195 bits (495), Expect = 4e-48
 Identities = 102/136 (75%), Positives = 108/136 (79%)
 Frame = -2

Query: 410 DNESIPKRDITIADETKKTVVVSLWNELATNTGQELLDIADKSPVIAIKSLRVGDFQGVS 231
           DNESIPKRDITIAD+TKKTVVVSLWNELAT TGQELLDI DKSPV+AIKSL+VGDFQGVS
Sbjct: 311 DNESIPKRDITIADDTKKTVVVSLWNELATTTGQELLDIVDKSPVVAIKSLKVGDFQGVS 370

Query: 230 LSTISKSAVLINPDIPEAKKLRCWYDSEGKDAAMAXXXXXXXXXXXXXXXSVYSDRVSLS 51
           LSTI KS VL+NP IPEAK LR WYD EGKDAAM                SVY+DRV LS
Sbjct: 371 LSTIGKSVVLVNPVIPEAKNLRSWYDFEGKDAAMDSVGSGSSPTSNNGIRSVYTDRVLLS 430

Query: 50  HITTNPSLGQDKPAFF 3
            IT+NPSLG  KPAFF
Sbjct: 431 DITSNPSLGDGKPAFF 446


>ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 620

 Score =  194 bits (492), Expect = 8e-48
 Identities = 99/136 (72%), Positives = 108/136 (79%)
 Frame = -2

Query: 410 DNESIPKRDITIADETKKTVVVSLWNELATNTGQELLDIADKSPVIAIKSLRVGDFQGVS 231
           DNESIPKRDITIAD+TKKTVVVSLWNELAT TG+ELLDI DKSPV+AIKSL+VGDFQGVS
Sbjct: 331 DNESIPKRDITIADDTKKTVVVSLWNELATTTGEELLDIVDKSPVVAIKSLKVGDFQGVS 390

Query: 230 LSTISKSAVLINPDIPEAKKLRCWYDSEGKDAAMAXXXXXXXXXXXXXXXSVYSDRVSLS 51
           LSTI +S VL+NPDIPEAK LR WYD EGKDAAM                SVY+DR+ LS
Sbjct: 391 LSTIGRSVVLVNPDIPEAKNLRSWYDFEGKDAAMDSVGSGSSPISNNGIRSVYTDRIHLS 450

Query: 50  HITTNPSLGQDKPAFF 3
            I +NPSLG  KPAFF
Sbjct: 451 DIISNPSLGDGKPAFF 466


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  190 bits (483), Expect = 9e-47
 Identities = 94/136 (69%), Positives = 111/136 (81%)
 Frame = -2

Query: 410 DNESIPKRDITIADETKKTVVVSLWNELATNTGQELLDIADKSPVIAIKSLRVGDFQGVS 231
           +N+ +PKRDITIAD+TKKTVVVSLWN+ ATN GQELLD ADK P++AIKSL+VGDFQGVS
Sbjct: 311 NNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVS 370

Query: 230 LSTISKSAVLINPDIPEAKKLRCWYDSEGKDAAMAXXXXXXXXXXXXXXXSVYSDRVSLS 51
           LST+SKS VL+NPD PE+KKLR WYDSEGK A+MA               S+Y DRVSLS
Sbjct: 371 LSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLS 430

Query: 50  HITTNPSLGQDKPAFF 3
           H+T+NPSLG+DKP+FF
Sbjct: 431 HVTSNPSLGEDKPSFF 446


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  190 bits (483), Expect = 9e-47
 Identities = 94/136 (69%), Positives = 111/136 (81%)
 Frame = -2

Query: 410 DNESIPKRDITIADETKKTVVVSLWNELATNTGQELLDIADKSPVIAIKSLRVGDFQGVS 231
           +N+ +PKRDITIAD+TKKTVVVSLWN+ ATN GQELLD ADK P++AIKSL+VGDFQGVS
Sbjct: 334 NNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVS 393

Query: 230 LSTISKSAVLINPDIPEAKKLRCWYDSEGKDAAMAXXXXXXXXXXXXXXXSVYSDRVSLS 51
           LST+SKS VL+NPD PE+KKLR WYDSEGK A+MA               S+Y DRVSLS
Sbjct: 394 LSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLS 453

Query: 50  HITTNPSLGQDKPAFF 3
           H+T+NPSLG+DKP+FF
Sbjct: 454 HVTSNPSLGEDKPSFF 469


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  190 bits (483), Expect = 9e-47
 Identities = 95/136 (69%), Positives = 112/136 (82%)
 Frame = -2

Query: 410 DNESIPKRDITIADETKKTVVVSLWNELATNTGQELLDIADKSPVIAIKSLRVGDFQGVS 231
           +N+ +PKRDITIAD+TKKTVVVSLWN+ ATN GQELLD ADK P++AIKSL+VGDFQGVS
Sbjct: 343 NNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVS 402

Query: 230 LSTISKSAVLINPDIPEAKKLRCWYDSEGKDAAMAXXXXXXXXXXXXXXXSVYSDRVSLS 51
           LST+SKS VL+NPD PE+KKLR WYDSEGK A+MA               S+Y DRVSLS
Sbjct: 403 LSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGVXSMYYDRVSLS 462

Query: 50  HITTNPSLGQDKPAFF 3
           H+T+NPSLG+DKP+FF
Sbjct: 463 HVTSNPSLGEDKPSFF 478


Top