BLASTX nr result
ID: Glycyrrhiza23_contig00022626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00022626
(1235 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ... 622 e-176
gb|AFK47126.1| unknown [Medicago truncatula] 620 e-175
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi... 535 e-150
ref|NP_177842.1| pentatricopeptide repeat-containing protein [Ar... 474 e-131
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ... 474 e-131
>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 447
Score = 622 bits (1603), Expect = e-176
Identities = 302/368 (82%), Positives = 326/368 (88%)
Frame = -2
Query: 1234 NALRVHVSMLRAGVLPDRYTLPIVLKAVCQSFAIQLGRQVHSAGIKLGLQSNEYCETGFI 1055
NALR++VSMLRAGVLPDRYTLPIVLKAV QSFAIQLG+QVHS GIKLGLQSNEYCE+GFI
Sbjct: 80 NALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFI 139
Query: 1054 SLYCKAGEFGSARKVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGI 875
+LYCKAG+F SA KVFDEN +PKLGSWNA+I GLSQ GLA DAI F+DMKRHGF PDGI
Sbjct: 140 NLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGI 199
Query: 874 TMVSLTSACGSIGDFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFA 695
TMVS+ SACGSIGD LALQLHK VFQA E ILMSNSLIDMYGKCGRMDLAY VFA
Sbjct: 200 TMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFA 259
Query: 694 TMEEWNVSSWTSMIVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQE 515
TME+ NVSSWTSMIVGYAMHGH KEAL CF CMRE+GV+PNYVTFIGVLSACVHGGTVQE
Sbjct: 260 TMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQE 319
Query: 514 GRYYFDMMKCVYGITPRLQHYGCMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGAC 335
GR+YFDMMK +YGITP+LQHYGCMV R+MVEEMPMKPNSVVWGCLMGAC
Sbjct: 320 GRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGAC 379
Query: 334 ETYGNVDMGEWVANHLQALEPWNDGVYVVLSNIYANKGMWEEVERIRSFMKEGRLAKVPA 155
E +GNVDM EWVA +LQALEPWN+GVYVVLSNIYANKG+W+EVERIRSFMKEGRLAK+PA
Sbjct: 380 EKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPA 439
Query: 154 YSLTTNSD 131
YS+TTNSD
Sbjct: 440 YSITTNSD 447
Score = 67.0 bits (162), Expect = 9e-09
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Frame = -2
Query: 994 DPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGITMVSLTSACGSIGDFLLALQ 815
+P +WN II ++ ++A+ ++ M R G PD T+ + A L Q
Sbjct: 59 NPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQ 118
Query: 814 LH----KCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFATMEEWNVSSWTSMIVG 647
+H K Q+N + I++Y K G D A++VF E + SW ++I G
Sbjct: 119 VHSYGIKLGLQSNE------YCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISG 172
Query: 646 YAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSAC 539
+ G +A+ F M+ G P+ +T + V+SAC
Sbjct: 173 LSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSAC 208
>gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 620 bits (1598), Expect = e-175
Identities = 301/368 (81%), Positives = 325/368 (88%)
Frame = -2
Query: 1234 NALRVHVSMLRAGVLPDRYTLPIVLKAVCQSFAIQLGRQVHSAGIKLGLQSNEYCETGFI 1055
NALR++VSMLRAGVLPDRYTLPIVLKAV QSFAIQLG+QVHS GIKLGLQSNEYCE+GFI
Sbjct: 80 NALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFI 139
Query: 1054 SLYCKAGEFGSARKVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGI 875
+LYCKAG+F SA KVFDEN +PKLGSWNA+I GLSQ GLA DAI F+DMKRHGF PDGI
Sbjct: 140 NLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGI 199
Query: 874 TMVSLTSACGSIGDFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFA 695
TMVS+ ACGSIGD LALQLHK VFQA E ILMSNSLIDMYGKCGRMDLAY VFA
Sbjct: 200 TMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFA 259
Query: 694 TMEEWNVSSWTSMIVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQE 515
TME+ NVSSWTSMIVGYAMHGH KEAL CF CMRE+GV+PNYVTFIGVLSACVHGGTVQE
Sbjct: 260 TMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQE 319
Query: 514 GRYYFDMMKCVYGITPRLQHYGCMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGAC 335
GR+YFDMMK +YGITP+LQHYGCMV R+MVEEMPMKPNSVVWGCLMGAC
Sbjct: 320 GRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGAC 379
Query: 334 ETYGNVDMGEWVANHLQALEPWNDGVYVVLSNIYANKGMWEEVERIRSFMKEGRLAKVPA 155
E +GNVDM EWVA +LQALEPWN+GVYVVLSNIYANKG+W+EVERIRSFMKEGRLAK+PA
Sbjct: 380 EKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPA 439
Query: 154 YSLTTNSD 131
YS+TTNSD
Sbjct: 440 YSITTNSD 447
Score = 65.1 bits (157), Expect = 4e-08
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Frame = -2
Query: 994 DPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGITMVSLTSACGSIGDFLLALQ 815
+P +WN II ++ ++A+ ++ M R G PD T+ + A L Q
Sbjct: 59 NPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQ 118
Query: 814 LH----KCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFATMEEWNVSSWTSMIVG 647
+H K Q+N + I++Y K G D A++VF E + SW ++I G
Sbjct: 119 VHSYGIKLGLQSNE------YCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISG 172
Query: 646 YAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSAC 539
+ G +A+ F M+ G P+ +T + V+ AC
Sbjct: 173 LSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCAC 208
>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
protein product [Vitis vinifera]
Length = 479
Score = 535 bits (1378), Expect = e-150
Identities = 254/367 (69%), Positives = 298/367 (81%)
Frame = -2
Query: 1231 ALRVHVSMLRAGVLPDRYTLPIVLKAVCQSFAIQLGRQVHSAGIKLGLQSNEYCETGFIS 1052
AL ++++M RAGV PD YT+PIVLKAVCQ+FA GRQVHS I+ GL+ NEYCE+GFIS
Sbjct: 113 ALSIYIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFIS 172
Query: 1051 LYCKAGEFGSARKVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGIT 872
+Y KAGEF +A KVF++N KLGSWNAIIGGLSQ G A++A+ F++M++ GF PD +T
Sbjct: 173 VYSKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVT 232
Query: 871 MVSLTSACGSIGDFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFAT 692
MVS+TSACGS+G LALQLHKCV+QA +E+ D L NSL+DMYGKCGRMDLAYRVF+
Sbjct: 233 MVSVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTLNSLVDMYGKCGRMDLAYRVFSR 292
Query: 691 MEEWNVSSWTSMIVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQEG 512
M+E NVSSWTSMIVGYAMHG + +AL+CF CMREAGVRPN+VTFIGVLSACVHGG VQEG
Sbjct: 293 MDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGGAVQEG 352
Query: 511 RYYFDMMKCVYGITPRLQHYGCMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGACE 332
+YYFDMM YG+ PR+QHYGCMV RKMVE MPMK N +VWGCLMGACE
Sbjct: 353 KYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGACE 412
Query: 331 TYGNVDMGEWVANHLQALEPWNDGVYVVLSNIYANKGMWEEVERIRSFMKEGRLAKVPAY 152
YGNV MGEWVA HL LEPWNDGV+VVLSNIYA++G+W EVER+R MKE +L KVPAY
Sbjct: 413 KYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLDKVPAY 472
Query: 151 SLTTNSD 131
SL TN+D
Sbjct: 473 SLATNAD 479
Score = 69.3 bits (168), Expect = 2e-09
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Frame = -2
Query: 976 WNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGITM-VSLTSACGSIGDFLLALQLHKCV 800
WN II ++ A+ +I M R G +PD T+ + L + C + Q+H
Sbjct: 97 WNNIIRSYTRLEAHHYALSIYIAMSRAGVSPDSYTIPIVLKAVCQAFATG-FGRQVHSVA 155
Query: 799 FQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFATMEEWNVSSWTSMIVGYAMHGHVKE 620
+ +++ + I +Y K G A++VF + SW ++I G + G KE
Sbjct: 156 IRHGL--ELNEYCESGFISVYSKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKE 213
Query: 619 ALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQEGRYYFDMMKCVY 479
A+ F MR+ G P+ VT + V SAC G++ + KCVY
Sbjct: 214 AVTMFMEMRKCGFEPDEVTMVSVTSAC---GSLGHLDLALQLHKCVY 257
>ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g77170 gi|332197823|gb|AEE35944.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 474 bits (1221), Expect = e-131
Identities = 220/367 (59%), Positives = 281/367 (76%)
Frame = -2
Query: 1234 NALRVHVSMLRAGVLPDRYTLPIVLKAVCQSFAIQLGRQVHSAGIKLGLQSNEYCETGFI 1055
+A++V++ M+R+ VLPDRY+LPIV+KA Q LG+++HS ++LG +E+CE+GFI
Sbjct: 100 DAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFI 159
Query: 1054 SLYCKAGEFGSARKVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGI 875
+LYCKAGEF +ARKVFDENP+ KLGSWNAIIGGL+ AG A +A+ F+DMKR G PD
Sbjct: 160 TLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDF 219
Query: 874 TMVSLTSACGSIGDFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFA 695
TMVS+T++CG +GD LA QLHKCV QA EK DI+M NSLIDMYGKCGRMDLA +F
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 694 TMEEWNVSSWTSMIVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQE 515
M + NV SW+SMIVGYA +G+ EAL+CF MRE GVRPN +TF+GVLSACVHGG V+E
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 514 GRYYFDMMKCVYGITPRLQHYGCMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGAC 335
G+ YF MMK + + P L HYGC+V +K+VEEMPMKPN +VWGCLMG C
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 334 ETYGNVDMGEWVANHLQALEPWNDGVYVVLSNIYANKGMWEEVERIRSFMKEGRLAKVPA 155
E +G+V+M EWVA ++ LEPWNDGVYVVL+N+YA +GMW++VER+R MK ++AK+PA
Sbjct: 400 EKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPA 459
Query: 154 YSLTTNS 134
YS + +
Sbjct: 460 YSYASTT 466
Score = 68.2 bits (165), Expect = 4e-09
Identities = 48/178 (26%), Positives = 79/178 (44%)
Frame = -2
Query: 1015 KVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGITMVSLTSACGSIG 836
++ D+ P L WN I+ + DAI ++ M R PD ++ + A I
Sbjct: 74 RILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 835 DFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFATMEEWNVSSWTSM 656
DF L +LH + D + I +Y K G + A +VF E + SW ++
Sbjct: 132 DFTLGKELHSVAVRLGFVG--DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 655 IVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQEGRYYFDMMKCV 482
I G G EA++ F M+ +G+ P+ T + V ++C G + + F + KCV
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC---GGLGDLSLAFQLHKCV 244
>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334968|gb|EFH65386.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 466
Score = 474 bits (1221), Expect = e-131
Identities = 220/367 (59%), Positives = 280/367 (76%)
Frame = -2
Query: 1234 NALRVHVSMLRAGVLPDRYTLPIVLKAVCQSFAIQLGRQVHSAGIKLGLQSNEYCETGFI 1055
++++V++ M+R+ VLPDRYTLPIV+KA Q LG+Q+HS ++LG +E+CE+GFI
Sbjct: 99 DSVQVYLGMVRSNVLPDRYTLPIVIKAAVQIHDFPLGKQLHSVAVRLGFVGDEFCESGFI 158
Query: 1054 SLYCKAGEFGSARKVFDENPDPKLGSWNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGI 875
+LYCKAGE +AR VFDENP+ KLGSWNAIIGGL+ AG A +A+ F++M+R GF PD
Sbjct: 159 TLYCKAGELENARNVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFMEMRRSGFEPDDF 218
Query: 874 TMVSLTSACGSIGDFLLALQLHKCVFQANATEKMDILMSNSLIDMYGKCGRMDLAYRVFA 695
TMVS+TSACG +GD LA QLHKCV QA EK D++M NSLIDMYGKCGRMD A +VF
Sbjct: 219 TMVSVTSACGGLGDLNLAFQLHKCVLQAKTEEKSDVMMMNSLIDMYGKCGRMDFAIQVFE 278
Query: 694 TMEEWNVSSWTSMIVGYAMHGHVKEALDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQE 515
M + NV SW+SMI GYA +G+ EAL+CF MRE GVRPN +TF+GVLSACVHGG V+E
Sbjct: 279 EMPQRNVVSWSSMITGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 338
Query: 514 GRYYFDMMKCVYGITPRLQHYGCMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGAC 335
G+ YF MMK + + P L HYGC+V +K+VEEMPMKPN +VWGCLMG C
Sbjct: 339 GKAYFAMMKSEFNLEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 398
Query: 334 ETYGNVDMGEWVANHLQALEPWNDGVYVVLSNIYANKGMWEEVERIRSFMKEGRLAKVPA 155
E +G+V+M EWVA ++ LEPWNDGVYVVL+N+YA KGMW++VER+R MKE ++AK+PA
Sbjct: 399 EKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALKGMWKDVERVRKVMKEKKVAKIPA 458
Query: 154 YSLTTNS 134
YS + +
Sbjct: 459 YSYASTT 465
Score = 74.3 bits (181), Expect = 6e-11
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 4/223 (1%)
Frame = -2
Query: 976 WNAIIGGLSQAGLARDAIHAFIDMKRHGFAPDGITMVSLTSACGSIGDFLLALQLHKCVF 797
WN I+ + D++ ++ M R PD T+ + A I DF L QLH
Sbjct: 84 WNNIMRSYIRHDSPLDSVQVYLGMVRSNVLPDRYTLPIVIKAAVQIHDFPLGKQLHSVAV 143
Query: 796 QANATEKMDILMSNSLIDMYGKCGRMDLAYRVFATMEEWNVSSWTSMIVGYAMHGHVKEA 617
+ D + I +Y K G ++ A VF E + SW ++I G G EA
Sbjct: 144 RLGFVG--DEFCESGFITLYCKAGELENARNVFDENPERKLGSWNAIIGGLNHAGRANEA 201
Query: 616 LDCFWCMREAGVRPNYVTFIGVLSACVHGGTVQEGRYYFDMMKCVYGITPR----LQHYG 449
++ F MR +G P+ T + V SAC G + + F + KCV +
Sbjct: 202 VEMFMEMRRSGFEPDDFTMVSVTSAC---GGLGDLNLAFQLHKCVLQAKTEEKSDVMMMN 258
Query: 448 CMVXXXXXXXXXXXXRKMVEEMPMKPNSVVWGCLMGACETYGN 320
++ ++ EEMP + N V W ++ GN
Sbjct: 259 SLIDMYGKCGRMDFAIQVFEEMPQR-NVVSWSSMITGYAANGN 300