BLASTX nr result

ID: Glycyrrhiza23_contig00022607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022607
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   168   6e-40
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   163   2e-38
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   158   6e-37
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   144   7e-33
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   124   8e-27

>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 2083

 Score =  168 bits (425), Expect = 6e-40
 Identities = 90/120 (75%), Positives = 102/120 (85%)
 Frame = -1

Query: 364 AKGRQRGKVGRSVRSTRDRKSYTASSRQRKFKSSFEGKDDESTAEDSNSESDEDFRSLKK 185
           AKGRQRGK G SVRSTRD K++TASSRQR+ KSSFE +D+ STAEDS+SESDEDF+SLKK
Sbjct: 272 AKGRQRGKFGPSVRSTRDCKAFTASSRQRRVKSSFEDEDENSTAEDSDSESDEDFKSLKK 331

Query: 184 RGVHVRKNSGRSAASTSISRHSNEVRTSSRTVRKVSYVXXXXXXEADEGKKKTSQKEEIE 5
           RGV VRKN+GRS+A+TS SR SNEVR+SSRT+RKVSYV       ADEG KK SQKEEIE
Sbjct: 332 RGVRVRKNNGRSSAATSFSRPSNEVRSSSRTIRKVSYVESDESEGADEGTKK-SQKEEIE 390


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  163 bits (412), Expect = 2e-38
 Identities = 84/120 (70%), Positives = 100/120 (83%)
 Frame = -1

Query: 361 KGRQRGKVGRSVRSTRDRKSYTASSRQRKFKSSFEGKDDESTAEDSNSESDEDFRSLKKR 182
           KGRQRGK+G++++STRDRK Y AS RQR+ KSSFEG  +EST EDS+S+SDEDF+S KKR
Sbjct: 306 KGRQRGKIGQNIKSTRDRKVYVASGRQRRVKSSFEG--NESTTEDSDSDSDEDFKSTKKR 363

Query: 181 GVHVRKNSGRSAASTSISRHSNEVRTSSRTVRKVSYVXXXXXXEADEGKKKTSQKEEIEE 2
            VHVRKN+GRS+A+T  S  ++E+RTSSRTVRKVSYV      EADEGKKK SQKEEIEE
Sbjct: 364 SVHVRKNNGRSSAATGFSSRNSEIRTSSRTVRKVSYVESEESEEADEGKKKKSQKEEIEE 423


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  158 bits (399), Expect = 6e-37
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = -1

Query: 361 KGRQRGKVGRSVRSTRDRKSYTASSRQRKFKSSFEGKDDESTAEDSNSESDEDFRSLKKR 182
           KGRQRGK+G++++STR+RK Y AS RQR+ KSSFE  D+EST EDS+S+ DEDF+S KKR
Sbjct: 309 KGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSFE--DNESTTEDSDSDGDEDFKSTKKR 366

Query: 181 GVHVRKNSGRSAASTSISRHSNEVRTSSRTVRKVSYVXXXXXXEADEGKKKTSQKEEIEE 2
            VHVRKN+GRS+A+T  S  ++EVRTSSRTVRKVSYV      EADE KKK SQKEEIEE
Sbjct: 367 SVHVRKNNGRSSAATGFSSRNSEVRTSSRTVRKVSYVESEESEEADEAKKKKSQKEEIEE 426


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  144 bits (364), Expect = 7e-33
 Identities = 75/120 (62%), Positives = 96/120 (80%)
 Frame = -1

Query: 361 KGRQRGKVGRSVRSTRDRKSYTASSRQRKFKSSFEGKDDESTAEDSNSESDEDFRSLKKR 182
           KGRQ+GKV ++++STRDRK+  ASSRQR+ KSSFE  D+EST EDS+S SD+DF+S +KR
Sbjct: 291 KGRQQGKVRKNIKSTRDRKACVASSRQRRLKSSFE--DNESTTEDSDSVSDDDFKSTRKR 348

Query: 181 GVHVRKNSGRSAASTSISRHSNEVRTSSRTVRKVSYVXXXXXXEADEGKKKTSQKEEIEE 2
             +VRKN+ R + +TS S H+++VRTSSR VRK+SYV      EAD+GKKK SQKEEIEE
Sbjct: 349 SFNVRKNNSRFSVTTSFSAHNSDVRTSSRAVRKISYVESDGSEEADDGKKKKSQKEEIEE 408


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  124 bits (312), Expect = 8e-27
 Identities = 69/120 (57%), Positives = 87/120 (72%)
 Frame = -1

Query: 361 KGRQRGKVGRSVRSTRDRKSYTASSRQRKFKSSFEGKDDESTAEDSNSESDEDFRSLKKR 182
           +G+QRGK  R+V+ST +RK Y +S RQRK K S+E  +DES+ EDS S+S E F+S  K 
Sbjct: 303 RGKQRGKGVRNVKSTSERKPYQSSIRQRKGKFSYE--EDESSMEDSASDSVEAFKSSVKT 360

Query: 181 GVHVRKNSGRSAASTSISRHSNEVRTSSRTVRKVSYVXXXXXXEADEGKKKTSQKEEIEE 2
           G H+RKNSGR + +  +S   +EVRTSSR+VRKVSYV      E DEGKKK SQKEE+EE
Sbjct: 361 GTHLRKNSGRYSVTAGVSGRRSEVRTSSRSVRKVSYVESEESEEFDEGKKKKSQKEEVEE 420