BLASTX nr result

ID: Glycyrrhiza23_contig00022602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022602
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   408   e-112
ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   402   e-110
ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicag...   397   e-108
ref|XP_002312702.1| predicted protein [Populus trichocarpa] gi|2...   350   1e-94
ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   348   5e-94

>ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 577

 Score =  408 bits (1048), Expect = e-112
 Identities = 207/246 (84%), Positives = 217/246 (88%)
 Frame = -1

Query: 739  IANINNEALSVXXXXXXXXXXXXXXXKQYVFVAATLPKNGKKTAGAILKHMFPDAEWVSG 560
            IA+INNEA +V               KQYVFVAATLP NGKKTAG +LK+MFPDAEWV G
Sbjct: 315  IADINNEAENVKLRDWRRVRKNYERSKQYVFVAATLPVNGKKTAGGVLKYMFPDAEWVCG 374

Query: 559  NYLHCHNPRLKQRWIEVTVDTQVDELIKAVKHSFGSEDLENAGGIHRTMVFANTVEAVEA 380
            +YLHCHNPRL+Q+WIEVTVDTQVDELIKAV H F SEDL NAGGIHRTMVFANTVEAVEA
Sbjct: 375  DYLHCHNPRLEQKWIEVTVDTQVDELIKAVNHRFRSEDLVNAGGIHRTMVFANTVEAVEA 434

Query: 379  VAKILMQSGIECLRYHKNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQAD 200
            VAKIL+ SGIEC RYHKNCTLEERAQTLVDFH KGGVLVCTDAAARGVDIPNVLHVIQ D
Sbjct: 435  VAKILLHSGIECSRYHKNCTLEERAQTLVDFHDKGGVLVCTDAAARGVDIPNVLHVIQVD 494

Query: 199  FATSAVDFLHRVGRTARAGQVGLITSMYTESNRELVDAVRRAGELGQPVETAFSRKRSFR 20
            FATSAVDFLHRVGRTARAGQ GL+TSMYTESNRELV+AVRRAGEL QPVETAFSRKRSFR
Sbjct: 495  FATSAVDFLHRVGRTARAGQFGLVTSMYTESNRELVNAVRRAGELDQPVETAFSRKRSFR 554

Query: 19   NKLKKR 2
            NKLKKR
Sbjct: 555  NKLKKR 560


>ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 579

 Score =  402 bits (1034), Expect = e-110
 Identities = 205/246 (83%), Positives = 216/246 (87%)
 Frame = -1

Query: 739  IANINNEALSVXXXXXXXXXXXXXXXKQYVFVAATLPKNGKKTAGAILKHMFPDAEWVSG 560
            I +INNEA +V               KQYVFVAATLP NGKKTAG +LK+MFPDAEWV G
Sbjct: 317  IVDINNEAGNVKLRDWRRVRKNYERSKQYVFVAATLPVNGKKTAGGVLKYMFPDAEWVCG 376

Query: 559  NYLHCHNPRLKQRWIEVTVDTQVDELIKAVKHSFGSEDLENAGGIHRTMVFANTVEAVEA 380
            NYLHCHNPRL+Q+WIEV VDTQVDELIKAV H F SEDL NAGGIHRTMVFANTVEAVEA
Sbjct: 377  NYLHCHNPRLEQKWIEVMVDTQVDELIKAVNHRFRSEDLVNAGGIHRTMVFANTVEAVEA 436

Query: 379  VAKILMQSGIECLRYHKNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQAD 200
            VAKIL++SGIEC RYHKNCTLEERAQTLVDF  KGGVLVCTDAAARGVDIPNVLHVIQAD
Sbjct: 437  VAKILLRSGIECSRYHKNCTLEERAQTLVDFQDKGGVLVCTDAAARGVDIPNVLHVIQAD 496

Query: 199  FATSAVDFLHRVGRTARAGQVGLITSMYTESNRELVDAVRRAGELGQPVETAFSRKRSFR 20
            FATSAVDFLHRVGRTARAGQ+GL+TSM TESNRELV+AVRRAGEL QPVETAFSRKRSFR
Sbjct: 497  FATSAVDFLHRVGRTARAGQIGLVTSMCTESNRELVNAVRRAGELDQPVETAFSRKRSFR 556

Query: 19   NKLKKR 2
            NKLKKR
Sbjct: 557  NKLKKR 562


>ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355522645|gb|AET03099.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 594

 Score =  397 bits (1020), Expect = e-108
 Identities = 202/248 (81%), Positives = 215/248 (86%), Gaps = 2/248 (0%)
 Frame = -1

Query: 739  IANINNEALSVXXXXXXXXXXXXXXXK--QYVFVAATLPKNGKKTAGAILKHMFPDAEWV 566
            IANINNEA SV               +  QYVFVAATLP NGKKTAGA+LKHMFPDAEWV
Sbjct: 329  IANINNEAESVKKTRRDWRRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWV 388

Query: 565  SGNYLHCHNPRLKQRWIEVTVDTQVDELIKAVKHSFGSEDLENAGGIHRTMVFANTVEAV 386
            SGNYLHCHNPRLKQRWIEVTVDTQV ELI+AV HS   EDL+   GIHRTMVFANTVEAV
Sbjct: 389  SGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKLEDLDIGSGIHRTMVFANTVEAV 448

Query: 385  EAVAKILMQSGIECLRYHKNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQ 206
            EAV KIL  +G+ECLRYHKNCTL+ERAQTLVDF+ KGGVLVCTDAAARGVDIPNV HVIQ
Sbjct: 449  EAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQ 508

Query: 205  ADFATSAVDFLHRVGRTARAGQVGLITSMYTESNRELVDAVRRAGELGQPVETAFSRKRS 26
            ADFATSAVDFLHR+GRTARAGQ+GL+TSMYTESNRELVDAVRRAGELG PVETAFSRKRS
Sbjct: 509  ADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRS 568

Query: 25   FRNKLKKR 2
            FRNK+KK+
Sbjct: 569  FRNKIKKK 576


>ref|XP_002312702.1| predicted protein [Populus trichocarpa] gi|222852522|gb|EEE90069.1|
            predicted protein [Populus trichocarpa]
          Length = 585

 Score =  350 bits (899), Expect = 1e-94
 Identities = 171/219 (78%), Positives = 196/219 (89%)
 Frame = -1

Query: 658  QYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVDELI 479
            QY+FVAATLP NGKKTAGA+LK MFPDA W+SG YLHCHNPRL+++W+EVTVDTQ+  LI
Sbjct: 351  QYIFVAATLPVNGKKTAGAMLKRMFPDANWISGTYLHCHNPRLERKWVEVTVDTQLHALI 410

Query: 478  KAVKHSFGSEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYHKNCTLEERAQT 299
            +AVK  F S+ L+   G+ RTMVFANTVEAVEAVAKIL ++GIEC RYHK+ +LEERA+T
Sbjct: 411  EAVKQGFRSDMLDYGAGVSRTMVFANTVEAVEAVAKILGKAGIECFRYHKDSSLEERAKT 470

Query: 298  LVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQVGLITSM 119
            LVDF +KGGV VCTDAAARGVDIP+V HVIQADFATSAVDFLHRVGRTARAG  GL+TS+
Sbjct: 471  LVDFREKGGVFVCTDAAARGVDIPDVSHVIQADFATSAVDFLHRVGRTARAGHHGLVTSL 530

Query: 118  YTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKR 2
            YTESNR+LVDA+R+A +LGQPVETAFSRKRSFRNKLKKR
Sbjct: 531  YTESNRDLVDAIRQAEKLGQPVETAFSRKRSFRNKLKKR 569


>ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Vitis vinifera]
            gi|296086509|emb|CBI32098.3| unnamed protein product
            [Vitis vinifera]
          Length = 593

 Score =  348 bits (894), Expect = 5e-94
 Identities = 167/219 (76%), Positives = 196/219 (89%)
 Frame = -1

Query: 658  QYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVDELI 479
            QY+FVAATLP NGKKTAG +LK MFPDA WVSG YLHCHNPRL+Q+WIEVTVDTQVD LI
Sbjct: 361  QYIFVAATLPVNGKKTAGGVLKRMFPDAHWVSGGYLHCHNPRLEQKWIEVTVDTQVDALI 420

Query: 478  KAVKHSFGSEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYHKNCTLEERAQT 299
             AVK  F S+ L++  G+ RTMVFANTVEAVEA++KIL ++G+EC RYH++ +LEERA+T
Sbjct: 421  DAVKQGFRSKVLDSGVGVSRTMVFANTVEAVEAISKILHRAGVECFRYHRDSSLEERAKT 480

Query: 298  LVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQVGLITSM 119
            LVDF +KGGVLVCTD+AARG+DIPN+ HVIQADFATSA+DFLHRVGRTARAGQ GL+TS+
Sbjct: 481  LVDFQQKGGVLVCTDSAARGLDIPNISHVIQADFATSALDFLHRVGRTARAGQFGLVTSL 540

Query: 118  YTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKR 2
            YTESNR+LV A+R+A +LGQPV+ AFSRKRSFRNKLKKR
Sbjct: 541  YTESNRDLVAAIRQADKLGQPVDAAFSRKRSFRNKLKKR 579


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