BLASTX nr result

ID: Glycyrrhiza23_contig00022592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022592
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]        118   4e-25
ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]         92   4e-17
ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806...    86   2e-15

>ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1764

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/102 (63%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2    GVLELNRYDPLKIDASSSGSSKNKNEHDKRSSSPTTESESQAALAHSHSMLSQLHLQKQS 181
            GVLE+N YDPLKI+  SSGSSK K+E+D RSS PT ES+ QAA+ HS  MLSQ H Q+QS
Sbjct: 1069 GVLEVNCYDPLKIEVPSSGSSKGKDENDNRSSFPT-ESDCQAAIVHSQGMLSQSHPQQQS 1127

Query: 182  DHKQHKVFHTSGQSQD-MQKSRESDFGDHNYAMRNENSKIDS 304
            +H+QH VFH SGQ++D MQK+R  DFG      RNE+SKIDS
Sbjct: 1128 NHEQHNVFHISGQTEDPMQKARGLDFG------RNESSKIDS 1163


>ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1881

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/103 (48%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2    GVLELNRYDPLKIDASSSGSSKNKNEHD-KRSSSPTTESESQAALAHSHSMLSQLHLQKQ 178
            G+L++N +DP K +AS+S   K K+E+   RSS  TTE   Q A  HS S++SQ+H Q+Q
Sbjct: 1174 GMLDVNCFDPFKTEASTSDFLKKKDENSMNRSSLQTTEPGGQVATTHSQSIVSQVHPQEQ 1233

Query: 179  SDHKQHKVFHTSGQSQD-MQKSRESDFGDHNYAMRNENSKIDS 304
            S+H+Q   F+ SGQ+QD MQK R SD G+   AMRN  ++I S
Sbjct: 1234 SNHQQQSFFNISGQTQDLMQKGRGSDLGEQKNAMRNGTNEISS 1276


>ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806794 [Glycine max]
          Length = 1903

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2    GVLELNRYDPLKIDASSSGSSKNKNEHDKRSSSPTTESESQAALAHSHSMLSQLHLQKQS 181
            G+LE+N +DP K +AS+S   K       RSS  TTE   Q A+ HS S+ SQ+H ++QS
Sbjct: 1204 GMLEVNGFDPFKTEASTSDLKKKDENGMNRSSLQTTEPAGQVAITHSQSIASQVHPREQS 1263

Query: 182  DHKQHKVFHTSGQSQD-MQKSRESDFGDHNYAMRNENSKIDS 304
            +H+Q   F+ SGQ+QD MQK R S  G+   A RN  ++I S
Sbjct: 1264 NHQQQSFFNISGQTQDLMQKERGSGLGEQKNATRNGTNEISS 1305


Top