BLASTX nr result

ID: Glycyrrhiza23_contig00022570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022570
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   177   6e-43
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   177   6e-43
ref|XP_003540264.1| PREDICTED: histone deacetylase 8-like isofor...   156   2e-36
ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isofor...   156   2e-36
emb|CAJ91129.1| histone deacetylase [Platanus x acerifolia]           148   4e-34

>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
           gi|87240922|gb|ABD32780.1| Histone deacetylase
           superfamily [Medicago truncatula]
           gi|355485930|gb|AES67133.1| Histone deacetylase
           [Medicago truncatula]
          Length = 386

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/104 (82%), Positives = 91/104 (87%)
 Frame = -2

Query: 492 QDSSAFDPNGRQCLTMDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLE 313
           QDSSAFDPNGRQCLTM+GYREIGRIV GLA RHSDGRLLIVQEGGYHVTYSAYCLHATLE
Sbjct: 282 QDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLE 341

Query: 312 GVXXXXXXXLQDPVACYLEDETFPVKVIEAIKNYIKDKMPLWKT 181
           GV       LQDPVA Y ED+TF VKVIEA++NY+ DKMPLWKT
Sbjct: 342 GVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNYVTDKMPLWKT 385


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
           [Medicago truncatula]
          Length = 386

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/104 (82%), Positives = 91/104 (87%)
 Frame = -2

Query: 492 QDSSAFDPNGRQCLTMDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLE 313
           QDSSAFDPNGRQCLTM+GYREIGRIV GLA RHSDGRLLIVQEGGYHVTYSAYCLHATLE
Sbjct: 282 QDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLE 341

Query: 312 GVXXXXXXXLQDPVACYLEDETFPVKVIEAIKNYIKDKMPLWKT 181
           GV       LQDPVA Y ED+TF VKVIEA++NY+ DKMPLWKT
Sbjct: 342 GVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNYVTDKMPLWKT 385


>ref|XP_003540264.1| PREDICTED: histone deacetylase 8-like isoform 2 [Glycine max]
          Length = 303

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/99 (77%), Positives = 84/99 (84%)
 Frame = -2

Query: 492 QDSSAFDPNGRQCLTMDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLE 313
           QDS+AFDPNGRQCLTM+GYREIGRIV  LA RHS GRLLIVQEGGYHVTYSAYCLHATLE
Sbjct: 204 QDSNAFDPNGRQCLTMEGYREIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLE 263

Query: 312 GVXXXXXXXLQDPVACYLEDETFPVKVIEAIKNYIKDKM 196
           G+       L DP+A YL+DETF V+VIEAIKNY KDK+
Sbjct: 264 GILNLPMPLLADPIAFYLDDETFSVQVIEAIKNYQKDKV 302


>ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
          Length = 381

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/99 (77%), Positives = 84/99 (84%)
 Frame = -2

Query: 492 QDSSAFDPNGRQCLTMDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLE 313
           QDS+AFDPNGRQCLTM+GYREIGRIV  LA RHS GRLLIVQEGGYHVTYSAYCLHATLE
Sbjct: 282 QDSNAFDPNGRQCLTMEGYREIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLE 341

Query: 312 GVXXXXXXXLQDPVACYLEDETFPVKVIEAIKNYIKDKM 196
           G+       L DP+A YL+DETF V+VIEAIKNY KDK+
Sbjct: 342 GILNLPMPLLADPIAFYLDDETFSVQVIEAIKNYQKDKV 380


>emb|CAJ91129.1| histone deacetylase [Platanus x acerifolia]
          Length = 212

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/102 (70%), Positives = 81/102 (79%)
 Frame = -2

Query: 492 QDSSAFDPNGRQCLTMDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLE 313
           QDSSAFDPNGRQCLTMDGYREIG+IV  LA + SDGRLLIVQEGGYH+TYSAYCLHATLE
Sbjct: 108 QDSSAFDPNGRQCLTMDGYREIGQIVHKLADKFSDGRLLIVQEGGYHITYSAYCLHATLE 167

Query: 312 GVXXXXXXXLQDPVACYLEDETFPVKVIEAIKNYIKDKMPLW 187
           G        L DP+A Y EDE   VKV+++IK Y KD +PL+
Sbjct: 168 GALDLPHLLLSDPIAYYPEDEALAVKVVDSIKQYWKDTVPLF 209


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