BLASTX nr result

ID: Glycyrrhiza23_contig00022558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022558
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235648.1| uncharacterized protein LOC100306480 [Glycin...   246   2e-63
gb|AFK42947.1| unknown [Lotus japonicus]                              243   2e-62
gb|ACJ84283.1| unknown [Medicago truncatula] gi|388519049|gb|AFK...   237   9e-61
ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   211   9e-53
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   208   4e-52

>ref|NP_001235648.1| uncharacterized protein LOC100306480 [Glycine max]
           gi|255628677|gb|ACU14683.1| unknown [Glycine max]
          Length = 139

 Score =  246 bits (628), Expect = 2e-63
 Identities = 124/137 (90%), Positives = 131/137 (95%)
 Frame = -3

Query: 510 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 331
           MDIISQLQEQVNL+AHLA NT+GTLQRDAPPNRLSPNYPEPPAH TE+G+NFSEQPKLMS
Sbjct: 1   MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMS 60

Query: 330 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAVKELNQVQ 151
           TTLVKAAKQFDALVAALPISE+ EEAQLKRI+ELQAENDAIG ELQKQLEAA KELNQVQ
Sbjct: 61  TTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEAAEKELNQVQ 120

Query: 150 ELFKQASDNCLNLKKAD 100
           ELF+QASDNCLNLKK D
Sbjct: 121 ELFRQASDNCLNLKKPD 137


>gb|AFK42947.1| unknown [Lotus japonicus]
          Length = 139

 Score =  243 bits (619), Expect = 2e-62
 Identities = 124/139 (89%), Positives = 130/139 (93%)
 Frame = -3

Query: 510 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 331
           MDIISQLQEQVNL+A+LA NTIGTLQRDAPPNR+SPNYPEPPA PTE+GA FSEQPKLMS
Sbjct: 1   MDIISQLQEQVNLIANLAFNTIGTLQRDAPPNRISPNYPEPPAQPTEDGATFSEQPKLMS 60

Query: 330 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAVKELNQVQ 151
           T LVKAAKQFDALVAALPI+E  EEAQLKRIAELQAENDAIGQELQKQLEAA KEL+QVQ
Sbjct: 61  TGLVKAAKQFDALVAALPIAEGGEEAQLKRIAELQAENDAIGQELQKQLEAAEKELHQVQ 120

Query: 150 ELFKQASDNCLNLKKADVN 94
           ELF QASDNCLNLKK DVN
Sbjct: 121 ELFSQASDNCLNLKKPDVN 139


>gb|ACJ84283.1| unknown [Medicago truncatula] gi|388519049|gb|AFK47586.1| unknown
           [Medicago truncatula]
          Length = 139

 Score =  237 bits (605), Expect = 9e-61
 Identities = 118/139 (84%), Positives = 129/139 (92%)
 Frame = -3

Query: 510 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 331
           MDIISQLQEQVNL+A+LALNT+GTLQR APPNRLSPNYPEPP HPTE+GANFSE+PKLM 
Sbjct: 1   MDIISQLQEQVNLIANLALNTVGTLQRGAPPNRLSPNYPEPPPHPTEDGANFSEEPKLMG 60

Query: 330 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAVKELNQVQ 151
            +LVKAAKQFD LVA+LPISE   EAQLKRIAELQAENDA+GQELQKQLEAA KELNQVQ
Sbjct: 61  ASLVKAAKQFDLLVASLPISETGGEAQLKRIAELQAENDAVGQELQKQLEAAEKELNQVQ 120

Query: 150 ELFKQASDNCLNLKKADVN 94
           EL++QA+DNCLNLKK DVN
Sbjct: 121 ELYRQATDNCLNLKKPDVN 139


>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  211 bits (536), Expect = 9e-53
 Identities = 109/138 (78%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
 Frame = -3

Query: 510 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAH-PTEEGANFSEQPKLM 334
           MDIISQLQEQVN +A LA NT GTLQRDAPP RLSPNYPEPP+  PTE+ A  +EQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 333 STTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAVKELNQV 154
           S  LVKAAKQFDALVAALP+S+  EE QLKRIAELQAEND +GQELQKQL+AA KEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 153 QELFKQASDNCLNLKKAD 100
           QELF Q +DNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  208 bits (530), Expect = 4e-52
 Identities = 108/138 (78%), Positives = 117/138 (84%), Gaps = 1/138 (0%)
 Frame = -3

Query: 510 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAH-PTEEGANFSEQPKLM 334
           MDIISQLQEQVN +A LA NT GTLQRDAPP RLSPNYPEPP+  PTE+ A  +EQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 333 STTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAVKELNQV 154
           S  LVKAAKQFDALVAALP+S+  EE QLKRIAELQAEND +GQELQKQL+AA KEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 153 QELFKQASDNCLNLKKAD 100
           QELF Q +DNCLNL KAD
Sbjct: 121 QELFSQVADNCLNLMKAD 138


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