BLASTX nr result

ID: Glycyrrhiza23_contig00022557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022557
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   411   e-112
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   404   e-110
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   339   5e-91
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   335   6e-90
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   322   9e-86

>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  411 bits (1056), Expect = e-112
 Identities = 212/279 (75%), Positives = 228/279 (81%)
 Frame = +3

Query: 3    KSEGKPSTRGPAMGHLIPGNMIRPVQAPEPQQGIQNVVNTQIAVAAQLQAMQAWAREHNI 182
            KSEGKPST+GP +GHLIPGNMIRP+Q PE QQGIQNVVNTQIAV+AQLQAMQAWARE NI
Sbjct: 219  KSEGKPSTQGPTIGHLIPGNMIRPMQGPETQQGIQNVVNTQIAVSAQLQAMQAWARERNI 278

Query: 183  DLSHPSNAHFMAQLIPLIQSRLVSQPKVSESSIGAQSSSLPVSKQQVNSPXXXXXXXXXX 362
            DLSHP+NAH MAQLIPL+QSR+VSQ KV+ES+IGAQSS +PVSKQQV SP          
Sbjct: 279  DLSHPANAHLMAQLIPLMQSRMVSQSKVNESNIGAQSSPVPVSKQQVTSPAVASESSAHA 338

Query: 363  XXXXXXXXXXXXXKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVI 542
                         KARQT P SHLGS +NAGI G+SSDMA QQF+VHGRESQAP R  V+
Sbjct: 339  NSSSDMSGQSGSSKARQTAPSSHLGSITNAGIAGNSSDMATQQFNVHGRESQAPPRQPVV 398

Query: 543  VGNGNGMPSMHSQQSSANTNLGADHALNAKTSPSGPEPPPMQYIRQLNQSTPQAGGPTNE 722
            V  GNGMPSMHSQQSSANTNLGADH LNAKTS SGPEPP MQY RQLNQS PQAGGPTNE
Sbjct: 399  V--GNGMPSMHSQQSSANTNLGADHPLNAKTSSSGPEPPQMQYTRQLNQSAPQAGGPTNE 456

Query: 723  GGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQILAFR 839
            GG GN AKSQG PAQMP ++T FTKQQLHVLKAQILAFR
Sbjct: 457  GGLGNPAKSQGRPAQMPQQRTNFTKQQLHVLKAQILAFR 495


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  404 bits (1038), Expect = e-110
 Identities = 208/279 (74%), Positives = 225/279 (80%)
 Frame = +3

Query: 3    KSEGKPSTRGPAMGHLIPGNMIRPVQAPEPQQGIQNVVNTQIAVAAQLQAMQAWAREHNI 182
            KSEGKP T+GP +GHLI GNMIRP+QAPE QQGIQNVVNTQIA +AQLQAMQAWARE NI
Sbjct: 217  KSEGKPLTQGPTIGHLISGNMIRPMQAPETQQGIQNVVNTQIAASAQLQAMQAWARERNI 276

Query: 183  DLSHPSNAHFMAQLIPLIQSRLVSQPKVSESSIGAQSSSLPVSKQQVNSPXXXXXXXXXX 362
            DLSHP+NAH MAQLIPL+QSR+VSQ KV+ESSIGAQSS +PVSKQQV SP          
Sbjct: 277  DLSHPANAHLMAQLIPLMQSRMVSQSKVNESSIGAQSSPVPVSKQQVTSPAVASESSAHA 336

Query: 363  XXXXXXXXXXXXXKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVI 542
                         KARQT PPSHLGS +NAGI G+SS+MA QQF+V GRESQAP R  V+
Sbjct: 337  NSSSDMSGQSGSSKARQTAPPSHLGSITNAGIAGNSSEMATQQFNVRGRESQAPPRQPVV 396

Query: 543  VGNGNGMPSMHSQQSSANTNLGADHALNAKTSPSGPEPPPMQYIRQLNQSTPQAGGPTNE 722
            V  GNGMPSMHSQQSSANTN  ADH LNAKTS SGPEPP MQY+RQLNQS PQAGGPTNE
Sbjct: 397  V--GNGMPSMHSQQSSANTNFSADHPLNAKTSSSGPEPPQMQYMRQLNQSAPQAGGPTNE 454

Query: 723  GGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQILAFR 839
            GGSGN+AKSQG P QMP  +T FTKQQLHVLKAQILAFR
Sbjct: 455  GGSGNHAKSQGPPTQMPQHRTSFTKQQLHVLKAQILAFR 493


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  339 bits (869), Expect = 5e-91
 Identities = 175/279 (62%), Positives = 207/279 (74%)
 Frame = +3

Query: 3    KSEGKPSTRGPAMGHLIPGNMIRPVQAPEPQQGIQNVVNTQIAVAAQLQAMQAWAREHNI 182
            KSEG  S++GPA+G+L+PGN+IRPVQA   QQ I N +N QIA+AAQL+AMQAWA E NI
Sbjct: 217  KSEGNSSSQGPAVGNLMPGNIIRPVQALATQQSIPNTMNNQIAMAAQLRAMQAWAHERNI 276

Query: 183  DLSHPSNAHFMAQLIPLIQSRLVSQPKVSESSIGAQSSSLPVSKQQVNSPXXXXXXXXXX 362
            DLSHP+NA+ MAQLIPL+QSR+V QPK +++++GA SS +PVS QQV SP          
Sbjct: 277  DLSHPANANLMAQLIPLMQSRIVQQPKANDTNLGAMSSPVPVSNQQVTSPAVASESSAHA 336

Query: 363  XXXXXXXXXXXXXKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVI 542
                         KARQT PPSHL    +AGI   SSDMA QQFS+HGR++Q  L+  V+
Sbjct: 337  NSSSDVSAQSGSAKARQTAPPSHLSPPISAGIASSSSDMAAQQFSLHGRDAQGSLKQSVL 396

Query: 543  VGNGNGMPSMHSQQSSANTNLGADHALNAKTSPSGPEPPPMQYIRQLNQSTPQAGGPTNE 722
              NG  MPS+H QQSSAN NLGADH LN KTS SG EP  MQYIRQL+QST QAGG TNE
Sbjct: 397  TING--MPSVHPQQSSANMNLGADHPLNVKTSSSGSEPAKMQYIRQLSQSTSQAGGLTNE 454

Query: 723  GGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQILAFR 839
            GGSGN+ K+QG P+QMP ++ GFTKQQLHVLKAQILAFR
Sbjct: 455  GGSGNHPKTQGGPSQMPQQRNGFTKQQLHVLKAQILAFR 493


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2175

 Score =  335 bits (860), Expect = 6e-90
 Identities = 181/263 (68%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
 Frame = +3

Query: 57  GNMIRPVQAPEPQQG-IQNVVNTQIAVAAQLQAMQAWAREHNIDLSHPSNAHFMAQLIPL 233
           G  IRP+QAPE QQG +QNV+NTQIAVA QLQ MQAWARE+NIDLSHP+NA+ MA+LIP+
Sbjct: 220 GQQIRPIQAPEAQQGSVQNVMNTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPM 279

Query: 234 IQSRLVSQPKVSESSIGAQSSSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXXXXKARQ 413
           +QSR+V  PK  ES++GAQSS +PVSKQQVNSP                       KAR 
Sbjct: 280 MQSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARH 339

Query: 414 TVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGNGMPSMHSQQSSA 593
           TVPPSHLG T+NA   GHSSDMAMQQF++HGRESQAPLR QV    GNGMPSMHSQQSSA
Sbjct: 340 TVPPSHLGPTTNA---GHSSDMAMQQFNIHGRESQAPLRQQVKA--GNGMPSMHSQQSSA 394

Query: 594 NTNLG-ADHALNAKTSPSGPEPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQM 770
             NLG ADH+LN K   S  EPP MQYIRQLNQST QAGGPT EGGS N AKSQ  PAQM
Sbjct: 395 AMNLGAADHSLNVKGLSSSAEPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQM 454

Query: 771 PDKQTGFTKQQLHVLKAQILAFR 839
           P++Q+ FTKQQLHVLKAQILAFR
Sbjct: 455 PERQSAFTKQQLHVLKAQILAFR 477


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  322 bits (824), Expect = 9e-86
 Identities = 170/279 (60%), Positives = 203/279 (72%)
 Frame = +3

Query: 3    KSEGKPSTRGPAMGHLIPGNMIRPVQAPEPQQGIQNVVNTQIAVAAQLQAMQAWAREHNI 182
            KSEG  S++G A+G+L+ GN+IRPVQ    QQ I N +N QIA+AAQL+AMQAWA E NI
Sbjct: 217  KSEGNSSSQG-AVGNLMSGNIIRPVQDLATQQSIPNSMNNQIAMAAQLRAMQAWAHERNI 275

Query: 183  DLSHPSNAHFMAQLIPLIQSRLVSQPKVSESSIGAQSSSLPVSKQQVNSPXXXXXXXXXX 362
            DLSHP+NA+ MAQLIPL+QSR+V QPK +++++G+ SS +PVS QQV SP          
Sbjct: 276  DLSHPANANLMAQLIPLMQSRMVQQPKANDTNLGSLSSPIPVSNQQVTSPAVASESSAHA 335

Query: 363  XXXXXXXXXXXXXKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVI 542
                         KARQT PPSHL    +AGI   SSDMA  QFS+HGR++Q  L+  V+
Sbjct: 336  HSSSDVSAQSGSAKARQTAPPSHLSPPISAGIASSSSDMAALQFSLHGRDAQGSLKQSVL 395

Query: 543  VGNGNGMPSMHSQQSSANTNLGADHALNAKTSPSGPEPPPMQYIRQLNQSTPQAGGPTNE 722
              NG  MPS+H QQSSAN NLGADH LNAK+S SG EP  MQYIRQLNQS  QAGG TNE
Sbjct: 396  TVNG--MPSVHPQQSSANMNLGADHPLNAKSSSSGSEPVKMQYIRQLNQSASQAGGLTNE 453

Query: 723  GGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQILAFR 839
            GGSGN+ K+QG P+QMP ++ GFTKQQLHVLKAQILAFR
Sbjct: 454  GGSGNHTKTQGGPSQMPQQRNGFTKQQLHVLKAQILAFR 492


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