BLASTX nr result

ID: Glycyrrhiza23_contig00022551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022551
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611124.1| F-box family protein [Medicago truncatula] g...   224   3e-56
ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...   223   4e-56
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...   223   6e-56
ref|XP_003619305.1| S locus F-box protein [Medicago truncatula] ...   222   1e-55
ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...   218   2e-54

>ref|XP_003611124.1| F-box family protein [Medicago truncatula]
           gi|355512459|gb|AES94082.1| F-box family protein
           [Medicago truncatula]
          Length = 551

 Score =  224 bits (570), Expect = 3e-56
 Identities = 135/272 (49%), Positives = 170/272 (62%), Gaps = 25/272 (9%)
 Frame = +2

Query: 98  DLPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDRGQV 277
           +LP H+T  IL  LPIKS+L+CRCVC+TWN LIS+P FAKL FE A V  +I   D   V
Sbjct: 33  NLPSHLTTHILLQLPIKSLLMCRCVCKTWNTLISEPHFAKLQFERAPVSFVIRNLDNIGV 92

Query: 278 PRTLHLLDYLDCESDKFESDECNNQVKL---FKLPLC---------DAEL--LLENKYET 415
            R L+L   L+CE++KFE    NN VKL   F+LPLC         DA+L  +++NK + 
Sbjct: 93  SRNLYL---LECEAEKFEIGS-NNHVKLDPIFELPLCNDISSRDKNDAKLYKVIKNKSKE 148

Query: 416 VH---------FDVVNSCNGLLCLHDPWKGYPLVVCNPVTGEFIRLPKTATIENTFDP-- 562
            +         F +VNSCNGLLCL +   G PLV+CNPVT EF  LP+  T  + F+   
Sbjct: 149 RYITCTSSRDKFGIVNSCNGLLCLSETSIGSPLVICNPVTREFTILPELTTTSDWFNSAR 208

Query: 563 IRAGFGFQSKTNEYKVIRMWEVCVRIRNEGNEWISMAEIHTIGTQTWRNVGVDPRFSISR 742
           ++AGF FQ KTNEYKVI +W   VR  N       + EIHT+GT +WRNV VDP+  IS 
Sbjct: 209 VQAGFSFQPKTNEYKVIIIWNKYVRRDNRLVFERVVLEIHTLGTPSWRNVEVDPQ--ISF 266

Query: 743 LRTLFPTCSNGALHWIYLRSLRRPSILCFK*E 838
           L+ L PTC NGALHWI   + ++ SILCF  E
Sbjct: 267 LKLLNPTCVNGALHWIIFEAWQQKSILCFNFE 298


>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score =  223 bits (568), Expect = 4e-56
 Identities = 132/255 (51%), Positives = 162/255 (63%), Gaps = 5/255 (1%)
 Frame = +2

Query: 89  TIADLPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDR 268
           + ADL   I  +IL  LPIK V IC+CVC+TWNALIS+P FA L+ +HA +  L+ T + 
Sbjct: 25  SFADLSSLIITNILLQLPIKDVSICKCVCKTWNALISEPYFATLYSQHASLGFLLRTRNL 84

Query: 269 GQVPRTLHLLDYLDCESDK-FESDECNNQVKLFKLPLCDAELLLEN---KYETVHFDVVN 436
             V RTLHLL+Y   +  + F+ D  N   K FKLPL +A    +    K E   F VVN
Sbjct: 85  RLVSRTLHLLEYQPKKFRRAFDIDVVNFNPK-FKLPLRNANDTYQPTPYKPEDDKFSVVN 143

Query: 437 SCNGLLCLHDPWKGYPLVVCNPVTGEFIRLPKTATIENTFDPIRAGFGFQSKTNEYKVIR 616
           SCNGLLCL +P+    LVVCNP+ GEFIRLP+   I NT  PI A  GFQ KTNEYKVIR
Sbjct: 144 SCNGLLCLSEPYTVNHLVVCNPIIGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIR 203

Query: 617 MWEVCVRIRNEGNEWISMAEIHTIGTQTWRNVGVDPRFSISRLRTLFPTCSNGALHWI-Y 793
           MW+ C     + +  + + E+HT+GT TWRNV VDP FS +RL +  PTC NGALHWI Y
Sbjct: 204 MWKRCDGWCYKSD--VMVVEMHTLGTATWRNVEVDPMFSFTRLGS--PTCVNGALHWINY 259

Query: 794 LRSLRRPSILCFK*E 838
               +  SILCF  E
Sbjct: 260 DDKNKTRSILCFNFE 274


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score =  223 bits (567), Expect = 6e-56
 Identities = 132/255 (51%), Positives = 162/255 (63%), Gaps = 5/255 (1%)
 Frame = +2

Query: 89  TIADLPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDR 268
           + ADL   I  +IL  LPIK V IC+CVC+TWNALIS+P FA L+ +HA +  L+ T + 
Sbjct: 25  SFADLSSLIITNILLQLPIKDVSICKCVCKTWNALISEPYFATLYSQHASLGFLLRTRNL 84

Query: 269 GQVPRTLHLLDYLDCESDK-FESDECNNQVKLFKLPLCDAELLLEN---KYETVHFDVVN 436
             V RTLHLL+Y   +  + F+ D  N   K FKLPL +A    +    K E   F VVN
Sbjct: 85  RLVSRTLHLLEYQPKKFRRAFDIDVVNFNPK-FKLPLRNANDTYQPTPYKPEDDKFGVVN 143

Query: 437 SCNGLLCLHDPWKGYPLVVCNPVTGEFIRLPKTATIENTFDPIRAGFGFQSKTNEYKVIR 616
           SCNGLLCL +P+    LVVCNP+ GEFIRLP+   I NT  PI A  GFQ KTNEYKVIR
Sbjct: 144 SCNGLLCLSEPYTVNHLVVCNPIIGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIR 203

Query: 617 MWEVCVRIRNEGNEWISMAEIHTIGTQTWRNVGVDPRFSISRLRTLFPTCSNGALHWI-Y 793
           MW+ C     + +  + + E+HT+GT TWRNV VDP FS +RL +  PTC NGALHWI Y
Sbjct: 204 MWKRCDGWCYKSD--VMVVEMHTLGTTTWRNVEVDPMFSFTRLGS--PTCVNGALHWINY 259

Query: 794 LRSLRRPSILCFK*E 838
               +  SILCF  E
Sbjct: 260 DDKNKTRSILCFNFE 274


>ref|XP_003619305.1| S locus F-box protein [Medicago truncatula]
           gi|355494320|gb|AES75523.1| S locus F-box protein
           [Medicago truncatula]
          Length = 471

 Score =  222 bits (565), Expect = 1e-55
 Identities = 128/268 (47%), Positives = 166/268 (61%), Gaps = 25/268 (9%)
 Frame = +2

Query: 101 LPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDRGQVP 280
           LP H+T  IL  LPIKS+LIC+CVC+ W  +IS+  FAKLHFE + + L+I T    +V 
Sbjct: 39  LPSHLTAHILLQLPIKSLLICKCVCKIWKRMISESHFAKLHFEQSPISLMIRTRYYKRVS 98

Query: 281 RTLHLLDYLDCESDKFESDECNNQVKL---FKLPL-CDAELL------LENKYETVH--- 421
           RTL+L   L+C+ +KFE    NN V L   F+LPL  D + L      ++NKY+ V+   
Sbjct: 99  RTLYL---LECDPEKFEIGS-NNHVNLEPIFRLPLRGDVKSLGMKSDKIKNKYKHVYIAG 154

Query: 422 ------FDVVNSCNGLLCLHDPWKGYPLVVCNPVTGEFIRLPKTATIENTFDPI-----R 568
                 F++VNSCNGLLCL +P  G P+V+CNP  GEFIRLP+T T+    D +      
Sbjct: 155 NSDRDKFNIVNSCNGLLCLSEPTTGNPIVICNPFMGEFIRLPETTTVRMPNDRVHVIGQE 214

Query: 569 AGFGFQSKTNEYKVIRMW-EVCVRIRNEGNEWISMAEIHTIGTQTWRNVGVDPRFSISRL 745
           AGFGF  KTNEYKVI +W    + + +   E + + EIHT+GT TWRN+ VDP+ S S L
Sbjct: 215 AGFGFYPKTNEYKVIHIWRRSVIHVNSSDFEHVFLVEIHTLGTPTWRNINVDPQISFSCL 274

Query: 746 RTLFPTCSNGALHWIYLRSLRRPSILCF 829
             + PTC NGALHW      R  SILCF
Sbjct: 275 --MNPTCVNGALHWFTFEG-REMSILCF 299


>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
           gi|355513504|gb|AES95127.1| F-box family protein
           [Medicago truncatula]
          Length = 1154

 Score =  218 bits (554), Expect = 2e-54
 Identities = 134/265 (50%), Positives = 170/265 (64%), Gaps = 21/265 (7%)
 Frame = +2

Query: 98  DLPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDRGQV 277
           +LP HI   +L  LPIKS+LIC CVC+ W  LIS+P FAKL+FE ++VCL+I   D   V
Sbjct: 49  NLPSHIIAHMLLHLPIKSLLICECVCKIWKTLISEPHFAKLNFERSQVCLMIRIDDCRLV 108

Query: 278 PRTLHLLDYLDCESDKFESDECNNQVKL---FKLPLCDAELL---LENKYETV------H 421
            RT++L   L+C+ +KF+    N++VKL   FKLPL +A      +ENK +         
Sbjct: 109 SRTMYL---LECDPEKFQIGS-NSRVKLAPIFKLPLRNANSYKEKIENKPKCPIRPYYDK 164

Query: 422 FDVVNSCNGLLCLHDPWKGYPLVVCNPVTGEFIRLPK-TATI--ENTFDPIR--AGFGFQ 586
           F VVNSCNGLLCL  P++G PLV+CNPVTGEFIRLPK TA +   +  D +   A FGFQ
Sbjct: 165 FGVVNSCNGLLCLRHPFEGRPLVICNPVTGEFIRLPKATANLIHNDIVDKVSGIAAFGFQ 224

Query: 587 SKTNEYKVIRMWEVCVRIRNEGNEWI---SMAEIHTIGTQTWRNVGVDPRFSI-SRLRTL 754
            KTNEYKV+ +W+  VR    GN W+    + EI+T+GT +WRN  VDP+ SI S L   
Sbjct: 225 PKTNEYKVMYIWDKYVR---RGNGWVFDHIVLEINTLGTPSWRNAEVDPQISIGSGLSLH 281

Query: 755 FPTCSNGALHWIYLRSLRRPSILCF 829
           +PT  NGALHWI      R SILCF
Sbjct: 282 YPTYVNGALHWIRFEDEER-SILCF 305



 Score =  207 bits (528), Expect = 2e-51
 Identities = 135/292 (46%), Positives = 169/292 (57%), Gaps = 48/292 (16%)
 Frame = +2

Query: 98   DLPYHITNSILH*LPIKSVLICRCVCRTWNALISDPLFAKLHFEHARVCLLIHTSDRGQV 277
            +LP HIT  IL  L IKS+LIC+CVC+ W  +IS+P FAKL FE A + L+I T+D   V
Sbjct: 711  NLPSHITTQILLQLSIKSLLICKCVCKIWKTMISEPHFAKLQFERAPLSLMIRTNDGRLV 770

Query: 278  PRTLHLLDYLDCESDKFESDECNNQVKL---FKLPLCDAE------------------LL 394
             RT++LL+   C+ +KFE    NN VKL   FKLPL +A                   L 
Sbjct: 771  SRTMYLLE---CDHEKFEIGS-NNHVKLAPIFKLPLRNANSYREKIENKPKRPIRAARLA 826

Query: 395  LENKYETVH----------------FDVVNSCNGLLCLHDPWKGYPLVVCNPVTGEFIRL 526
            LE   E  +                F V NSCNGLLCL  P   +PL +CNPVTGEFI+L
Sbjct: 827  LEKNGENSNGDSQRLNIDFKPYYDKFGVANSCNGLLCLCCPSDEHPLSICNPVTGEFIKL 886

Query: 527  PKTATIENTFD---PI----RAGFGFQSKTNEYKVIRMWEVCVRIRNEGNEWI---SMAE 676
            P+ ATI NT D   P+    + GFGFQ KTNEYKVIR+W   V+    GN W+    + E
Sbjct: 887  PE-ATI-NTHDERSPLNMRGQVGFGFQPKTNEYKVIRIWGSDVK---RGNRWVFDRMVLE 941

Query: 677  IHTIGTQTWRNVGVDPRFSI-SRLRTLFPTCSNGALHWIYLRSLRRPSILCF 829
            I+T+GT +WRN  VDP+ SI S +   +PTC NG +HWI  +   R SILCF
Sbjct: 942  IYTLGTPSWRNAEVDPQISIGSNIWLRYPTCVNGTIHWIRFKGQER-SILCF 992


Top