BLASTX nr result

ID: Glycyrrhiza23_contig00022542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022542
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594398.1| hypothetical protein MTR_2g028180 [Medicago ...   112   3e-23
ref|XP_003534753.1| PREDICTED: uncharacterized protein LOC100779...    87   1e-15
ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    82   5e-14
ref|XP_002329971.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002525243.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>ref|XP_003594398.1| hypothetical protein MTR_2g028180 [Medicago truncatula]
           gi|355483446|gb|AES64649.1| hypothetical protein
           MTR_2g028180 [Medicago truncatula]
          Length = 329

 Score =  112 bits (280), Expect = 3e-23
 Identities = 63/126 (50%), Positives = 79/126 (62%), Gaps = 12/126 (9%)
 Frame = +3

Query: 3   FHTVEEFDDMVDQTWLTKSQIVQNQSEFNNTEEGD------------GSLNNIPSSGIKN 146
           FHTVEE+DD+V++ WL KSQI Q QSEFNN +E D             S+  +   G+  
Sbjct: 147 FHTVEEYDDIVNRIWLNKSQIDQ-QSEFNNEDEDDVSVIKMDLQDKDSSIKKMQPVGLNK 205

Query: 147 EEVVPIPSHKIRVLESVAQRVISTIEKGHKRKAVAKRLESLRIPSNVECPAIGSLREWLP 326
           +    +PSHK ++LE           KG+KRKA+A RLESLR+PSNVE  AI SL+EWLP
Sbjct: 206 KNEERVPSHKTKMLE-----------KGNKRKAIANRLESLRVPSNVESSAITSLKEWLP 254

Query: 327 EDGIYS 344
            DGIYS
Sbjct: 255 ADGIYS 260


>ref|XP_003534753.1| PREDICTED: uncharacterized protein LOC100779669 [Glycine max]
          Length = 381

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/107 (49%), Positives = 66/107 (61%)
 Frame = +3

Query: 24  DDMVDQTWLTKSQIVQNQSEFNNTEEGDGSLNNIPSSGIKNEEVVPIPSHKIRVLESVAQ 203
           +++ ++  + ++  +   SE +         ++I SSGIKNE VVP  SHK         
Sbjct: 214 EEIEERKVVKETDNLSTTSEISTVATTPSPKSHISSSGIKNEGVVP--SHKT-------- 263

Query: 204 RVISTIEKGHKRKAVAKRLESLRIPSNVECPAIGSLREWLPEDGIYS 344
              STIEKG KRKAVAKRLESLRIP+ VE PAI SLREWLP  GIYS
Sbjct: 264 ---STIEKGIKRKAVAKRLESLRIPTGVEYPAIASLREWLPASGIYS 307


>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/112 (47%), Positives = 68/112 (60%)
 Frame = +3

Query: 3   FHTVEEFDDMVDQTWLTKSQIVQNQSEFNNTEEGDGSLNNIPSSGIKNEEVVPIPSHKIR 182
           FHTVEE+DD+V++ WL KSQI Q QSE NN E+ DGS+       IK +          +
Sbjct: 548 FHTVEEYDDIVNRIWLNKSQIDQ-QSEVNN-EDDDGSV-------IKMD---------FQ 589

Query: 183 VLESVAQRVISTIEKGHKRKAVAKRLESLRIPSNVECPAIGSLREWLPEDGI 338
             + + Q+ +        R+A+A RLESL +PSNVE   I SLREWLPEDGI
Sbjct: 590 WFQVIKQKCL--------RRAIANRLESLGVPSNVESTDIASLREWLPEDGI 633


>ref|XP_002329971.1| predicted protein [Populus trichocarpa] gi|222871993|gb|EEF09124.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 44/158 (27%)
 Frame = +3

Query: 3   FHTVEEFDDMVDQTWLTKSQIV-------------------------QNQSEFNNTEEGD 107
           FHT+EEFD ++++  L+K Q +                         ++ ++ NN +E  
Sbjct: 158 FHTIEEFDALIEKLKLSKEQKIGYDGGDDGSVTGVKLNQFRSSTHASEHSADSNNIQETH 217

Query: 108 GSLNN---------------IPSSGIKNEEVVPIPSHKIRVLESVAQRVIS---TIEKGH 233
             +N+               + +S + +E+++ IPS      ES      S    ++KG 
Sbjct: 218 SHINDSTPPEANSIIEENPTLSNSELASEKLIAIPSRSNTATESEVVEDSSQGHILKKGF 277

Query: 234 KRKAVAKRLESLRIPSNVECPAIGSLREWLPEDG-IYS 344
           KRK++AK LES+ IP  +E PA+  L+EWL   G +YS
Sbjct: 278 KRKSIAKGLESIEIPHTIEFPAVTGLKEWLRVGGRVYS 315


>ref|XP_002525243.1| conserved hypothetical protein [Ricinus communis]
           gi|223535540|gb|EEF37209.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
 Frame = +3

Query: 3   FHTVEEFDDMVDQ-------------------TWLTKSQIVQNQSEFNNTEEGDGSLNNI 125
           FHTVEE+D M+ Q                   T L +S + +   E N+  +    L + 
Sbjct: 130 FHTVEEYDAMIRQLSSSGALHTVSNGKHEGSRTKLQQSLLKEGMLEENSKIDATSELGS- 188

Query: 126 PSSGIKNEEVVPIPSHKIRVLESVAQRVISTIEKGHKRKAVAKRLESLRIPSNVECPAIG 305
               I N  + P  + +++V+E  +Q     +EKG KRK++AKRL SL+IP  +E  A+ 
Sbjct: 189 -RELIANPNISPA-NKEVKVVEDSSQEGY-ILEKGLKRKSIAKRLHSLQIPHTIEFSAVA 245

Query: 306 SLREWLPEDG-IYS 344
           SLREWL   G +YS
Sbjct: 246 SLREWLNSGGQVYS 259


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