BLASTX nr result

ID: Glycyrrhiza23_contig00022533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022533
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591411.1| Hybrid signal transduction histidine kinase ...   150   1e-34
ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glyci...   131   5e-29
ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...   108   4e-22

>ref|XP_003591411.1| Hybrid signal transduction histidine kinase I [Medicago truncatula]
           gi|355480459|gb|AES61662.1| Hybrid signal transduction
           histidine kinase I [Medicago truncatula]
          Length = 486

 Score =  150 bits (379), Expect = 1e-34
 Identities = 77/116 (66%), Positives = 93/116 (80%)
 Frame = +2

Query: 2   RGVPLSAMDHGTEYIPSMFKKTSIGAAPGFILIVIDANAGPFSELRRIVSNFKKDLHNPN 181
           R VP  AMDHG EY+ SMFKK + GAAP F+LI+IDANAGPFS+L +IVSNFKKDL NP+
Sbjct: 184 RRVPFKAMDHGNEYLSSMFKKNN-GAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPS 242

Query: 182 RCNVVWLDKPHIHSINSKTIDENDIVISKPFHGSRLFQVIMLLPEYGGGAWQSSSK 349
           +  VVWL+KP   S++ + ID++D VISKPFHGSRLFQVI LLPE+GG    +SSK
Sbjct: 243 K--VVWLEKPFESSVDYQAIDQDDNVISKPFHGSRLFQVIKLLPEFGGSWISNSSK 296


>ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glycine max]
          Length = 1056

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
 Frame = +2

Query: 5    GVPLSAMDHGTEYIPSMFKKTSIGAAPGFILIVIDANAGPFSELRRIVSNFKKDLHNPNR 184
            GVPLSA D GT YI S+FK+T I A+ GF+LIVIDANAGPFSEL ++V+ FK+ L  P  
Sbjct: 747  GVPLSAQD-GTNYISSIFKRTDIEASSGFVLIVIDANAGPFSELCKVVAEFKRGLCYP-- 803

Query: 185  CNVVWLDKPHIHSINSKTIDE-----NDIVISKPFHGSRLFQVIMLLPEYGGGAWQSSSK 349
            C VVWL+ P I S+++K +++     NDIV+SKP HG RLFQVI +LPEY GG W  SS 
Sbjct: 804  CRVVWLENPLIPSVDNKILNKDVSNSNDIVLSKPLHGHRLFQVIRILPEY-GGVWPCSSS 862

Query: 350  RESSHDDRAGKT 385
                   +   T
Sbjct: 863  ETKKEKGQVSLT 874


>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
 Frame = +2

Query: 2    RGVPLSAMDHGTEYIPSMFKKTSIGAAPGFILIVIDANAGPFSELRRIVSNFKKDLHNPN 181
            + VPLS+MD G +  PS    +++  APGF+L+VIDA AGPF EL R+V+ FK+DLH+ +
Sbjct: 793  KDVPLSSMD-GIDQKPSASGSSNLRGAPGFVLLVIDAGAGPFQELCRVVAEFKRDLHS-S 850

Query: 182  RCNVVWLDKPHIHSINSKT-----IDENDIVISKPFHGSRLFQVIMLLPEYGGGAWQSSS 346
             C VVWLDKP   SIN ++     ID  D ++ KPFHGSRL+QVI LLPE+GG    S S
Sbjct: 851  CCKVVWLDKPTSRSINLRSFEQDLIDPRDDILLKPFHGSRLYQVIRLLPEFGGHELISRS 910

Query: 347  KRESS 361
            KRE++
Sbjct: 911  KRENA 915


>ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|222839404|gb|EEE77741.1|
            predicted protein [Populus trichocarpa]
          Length = 1119

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/112 (51%), Positives = 78/112 (69%), Gaps = 5/112 (4%)
 Frame = +2

Query: 2    RGVPLSAMDHGTEYIPSMFKKTSIGAAPGFILIVIDANAGPFSELRRIVSNFKKDLHNPN 181
            + VPLS+MD G +   S  + +++  APGF+L+VIDA AGPF EL R+V+ FK+DLH+ +
Sbjct: 787  KDVPLSSMD-GIDQKLSASRNSNLRGAPGFVLLVIDAGAGPFQELCRVVAEFKRDLHS-S 844

Query: 182  RCNVVWLDKPHIHSINSK-----TIDENDIVISKPFHGSRLFQVIMLLPEYG 322
             C VVWLDK    S+N +      ID  D ++ KPFHGSRL+QVI LLPE+G
Sbjct: 845  CCKVVWLDKQTSRSMNLRGFEQDLIDPRDDILLKPFHGSRLYQVIRLLPEFG 896


>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score =  108 bits (270), Expect = 4e-22
 Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
 Frame = +2

Query: 2    RGVPLSAMDHGTEYIPSMFKKTSIGAAPGFILIVIDANAGPFSELRRIVSNFKKDLHNPN 181
            + +PLSAMD GT+      +KT     P FILI+I+A AGPF EL R V+ F+KDL N  
Sbjct: 805  KDMPLSAMD-GTDLTLPTPRKTYARGTPRFILILIEATAGPFPELCRAVAEFRKDLQN-T 862

Query: 182  RCNVVWLDKPHIHSINSKTIDE-----NDIVISKPFHGSRLFQVIMLLPEYGG 325
             C  VWLDKP + S+N + + E     ND+V+ KPFHGSRL+QV  LLPE+GG
Sbjct: 863  CCRAVWLDKPTLRSVNFRDVPEEMISPNDLVMLKPFHGSRLYQVAKLLPEFGG 915


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