BLASTX nr result

ID: Glycyrrhiza23_contig00022526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022526
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   122   4e-26
ref|XP_003592648.1| hypothetical protein MTR_1g110540 [Medicago ...    60   2e-07
ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779...    57   2e-06
ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]...    56   3e-06
gb|AAM61614.1| unknown [Arabidopsis thaliana]                          56   3e-06

>ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 233

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/97 (65%), Positives = 73/97 (75%), Gaps = 6/97 (6%)
 Frame = +1

Query: 1   WKLVLYP------MGSGISLYLALEVSTLPPDTKLVVDCTLRAKDQISGQHAQLKFCRKF 162
           WKL+LYP       G+ ISL+L LEVSTLPP+TKLVV+CTLRAK QISG HAQ  FCRKF
Sbjct: 126 WKLILYPNGIVEGKGNSISLFLTLEVSTLPPNTKLVVECTLRAKKQISGHHAQTGFCRKF 185

Query: 163 SSSIFLRGSGELVALAKLKNSKSGLLVEDSCIFEAEF 273
           SSS    G+ +LVALAKL +  SG LV D+CI EAEF
Sbjct: 186 SSSNSTWGTRQLVALAKLTDPNSGFLVNDTCILEAEF 222


>ref|XP_003592648.1| hypothetical protein MTR_1g110540 [Medicago truncatula]
           gi|355481696|gb|AES62899.1| hypothetical protein
           MTR_1g110540 [Medicago truncatula]
          Length = 63

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 25  GSGISLYLALEVSTLPPDTKLVVDCTLRAKDQISGQHAQLK 147
           G+ ISL+LAL VSTLP +TK++VDCTLRAKDQI G+H + K
Sbjct: 4   GTNISLFLALGVSTLPSNTKILVDCTLRAKDQIYGKHVERK 44


>ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max]
          Length = 310

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
 Frame = +1

Query: 1   WKLVLYPMGSG------ISLYLAL-EVSTLPPDTKLVVDCTLRAKDQISGQHAQLKFCRK 159
           WK+ LYP G G      +SLYLAL + S L P +K+    TLR  DQ   +H   K    
Sbjct: 203 WKIKLYPKGKGAELGNYLSLYLALADPSALSPCSKIYAQITLRILDQKQAKHHFGKANYW 262

Query: 160 FSSSIFLRGSGELVALAKLKNSKSGLLVEDSCIFEAE 270
           FS+S    G+   + +    N   G +V+DSC  EAE
Sbjct: 263 FSASSHENGAAIFMPINNFTNQNFGYVVKDSCFVEAE 299


>ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
           gi|332642426|gb|AEE75947.1| TRAF-like family protein
           [Arabidopsis thaliana]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
 Frame = +1

Query: 1   WKLVLYPMGSG------ISLYLAL-EVSTLPPDTKLVVDCTLRAKDQISGQHAQLKFCRK 159
           WK+  YP G+       +S+YL L +  T+   TK+ V+ T+R  DQ+ G+H   K  + 
Sbjct: 203 WKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKW 262

Query: 160 FSSSIFLRGSGELVALAKLKNSKSGLLVEDSCIFEAE 270
           FS S    G  + V++       SGLL++D C+ EA+
Sbjct: 263 FSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEAD 299


>gb|AAM61614.1| unknown [Arabidopsis thaliana]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
 Frame = +1

Query: 1   WKLVLYPMGSG------ISLYLAL-EVSTLPPDTKLVVDCTLRAKDQISGQHAQLKFCRK 159
           WK+  YP G+       +S+YL L +  T+   TK+ V+ T+R  DQ+ G+H   K  + 
Sbjct: 203 WKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKW 262

Query: 160 FSSSIFLRGSGELVALAKLKNSKSGLLVEDSCIFEAE 270
           FS S    G  + V++       SGLL++D C+ EA+
Sbjct: 263 FSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEAD 299


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